| DPOGS213218 | ||
|---|---|---|
| Transcript | DPOGS213218-TA | 225 bp |
| Protein | DPOGS213218-PA | 74 aa |
| Genomic position | DPSCF300114 + 464551-464775 | |
| RNAseq coverage | 0x (Rank: top 99%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL017084 | 1e-35 | 98.65% | |
| Bombyx | BGIBMGA007412-TA | 3e-33 | 91.89% | |
| Drosophila | RpL34b-PA | 4e-21 | 69.84% | |
| EBI UniRef50 | UniRef50_Q9NB34 | 8e-20 | 69.84% | 60S ribosomal protein L34 n=47 Tax=Eukaryota RepID=RL34_AEDTR |
| NCBI RefSeq | NP_001093076.1 | 2e-31 | 91.89% | ribosomal protein L34 [Bombyx mori] |
| NCBI nr blastp | gi|342356407 | 1e-32 | 98.65% | ribosomal protein L34 [Heliconius melpomene cythera] |
| NCBI nr blastx | gi|342356407 | 4e-34 | 98.65% | ribosomal protein L34 [Heliconius melpomene cythera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 8.1e-29 | ribosome | |
| GO:0006412 | 8.1e-29 | translation | ||
| GO:0005622 | 8.1e-29 | intracellular | ||
| GO:0003735 | 8.1e-29 | structural constituent of ribosome | ||
| KEGG pathway | nvi:100113629 | 7e-25 | ||
| K02915 (RP-L34e, RPL34) | maps-> | Ribosome | ||
| InterPro domain | [1-63] IPR008195 | 8.1e-29 | Ribosomal protein L34Ae | |
| Orthology group | MCL11479 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213218-TA
CAGTGCAAGAGCAAGTTGAGAGGCATCCAACCGGCCAGGCCTGCTGAGCGTTCCAGACTTTGCTACCGTAAGAAAACTGTGAAACGTGTATATGGTGGTGTCCTCTGCCACAAGTGCGTAAAACAGCGCATCGTCAGAGCCTTCCTGATTGAAGAACAGAAAATTGTCAAGGTCCTTAAGGCCCAGCAAGCCACCGCTAGACCCAGCAAAAAGGCCGCAAAATGA
>DPOGS213218-PA
QCKSKLRGIQPARPAERSRLCYRKKTVKRVYGGVLCHKCVKQRIVRAFLIEEQKIVKVLKAQQATARPSKKAAK-