Monarch geneset OGS2.0

DPOGS213227
TranscriptDPOGS213227-TA2010 bp
ProteinDPOGS213227-PA669 aa
Genomic positionDPSCF300394 - 16179-23631
RNAseq coverage868x (Rank: top 15%)
Annotation
HeliconiusHMEL0169660.091.13% 
BombyxBGIBMGA002343-TA0.089.63% 
DrosophilaTrc8-PD0.052.98% 
EBI UniRef50UniRef50_E0VTX20.060.88%Synoviolin, putative n=3 Tax=Neoptera RepID=E0VTX2_PEDHC
NCBI RefSeqXP_002429566.10.060.88%synoviolin, putative [Pediculus humanus corporis]
NCBI nr blastpgi|3504151190.061.85%PREDICTED: protein TRC8 homolog [Bombus impatiens]
NCBI nr blastxgi|3504151190.061.85%PREDICTED: protein TRC8 homolog [Bombus impatiens]
Group
Gene OntologyGO:00055151.2e-06protein binding
GO:00082701.2e-06zinc ion binding
KEGG pathwayath:AT1G650402e-13 
 K10601 (SYVN1, HRD1)maps-> Ubiquitin mediated proteolysis
    Protein processing in endoplasmic reticulum
InterPro domain[586-638] IPR0130833.5e-13Zinc finger, RING/FYVE/PHD-type
[588-625] IPR0018411.2e-06Zinc finger, RING-type
Orthology groupMCL14301 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213227-TA
ATGTCTTTGAGGTCGAAAGCCCTTGCGCTGGTGGAGGTATTATTGCGGGTGCCCCCATTGTTTGTGGTGGATGAGTTCCTGAAGATAAGCCTGGGGCTGCCGGTGTCCACTGGCGAGGAAGTGTCGCTGTTGTCCAACGTGACTATTGACCACGTAGATATAACAGACGCAGACGGCAATTACTATGACTCCAACTTCTACAACACTTTCGTCTTCACACTCGTTAAATTCTTCGTATGTTGTCTGGGATGTATGACAGCGCTGTGCATATTCGTGCTCTATACAAAACACCTCATCATAGTCTACTTGTATCTAATGTCGCTAGGGATAGTGTTCGTGTCGTACTGGACAAACGTGTCCGCCATCAAACAGATCCAGACTCTGATACAGACGGCGACCACTCCGCACTCGGCCAGTATACTGGAGGACATCCTGGACTTGAATCTAAAAAGACTGCTCGATCTCGAAGGTCCCGGTATACTGGTTATCCAGAACTTCGCCATACAGTTCATACTGTCGGTCCTGTTTAGAAATGTACATCTCGGGCCTCGACATCCGACTATCCAGAAGCTGTTGCCGTTAAGCTTCATGGCTCCGTCTTTCCTGGCGATGCTGCCGGTGTCGCAGAATGTATTGCATCACTCCCCCGTGTTCTCGTCGCTGTTGCCGTTGGTGCTGGTTCAGTACGCGATATGGGCGTCCAGCTATGACGTCATACAAGTAATCTACGCCGGCTACCAGCACGGAAGACTGTTCGTCAGTCACAACGGCTTGTCCGCGCTGGTGGAGACGGAATGGATGAGGCTGAACGTGCCCTGTGTGTTGAGAGTGTTCTGGGTGATGCGTGTCGCTGAGCACGCGATACTGCTGCTCATGGAGACCTACGATGACGAGGGTGACGAAGGCCTGAAGGTGTCAACGCTGCTGGCCGTACAGTCGCTCGCCTCCATGGCCAAGTCCTTGTTAGTGACGGGTTGCGAAACCATAACGGCCGTCTTGGGCATGACTTCCGTGATATCGTTCTTCTGCCACTACATCGGTAACTTCTTCCAATGGATACTGCTGACGGAGGAGGAGGAGGATAAGAGTATAGGCACAGTGTCAGCTATACTGTTTTACATACTCGCCCTCCAGACGGGACTGACCTCTTTGAATCCGGAGAAGAGATTCATCCGTTTGTGCCGAAATTTCTGCTTACTATTCACGGCTCTGCTGCATTTCCTGCATAACATAGTGAATCCGATGCTGATGTCATTGAGTGCGGCCCACAATCCGAGCACCCACAGGCACGTGCGAGCGCTGGGCGTGTGCGCTTTTCTCATAATCTTCCCGATATCGCTACTGGTGTACCTCTGGTCCCAGCACTCCATCTCCACCTGGCTGCTCGCGGTCAGCGTGTTCAGCATAGAGGTCATCGTCAAAGTCATCGTCAGCCTGATGATATACTCGCTCTTCCTGTTCGACGCCTACAGGAGCACGTTCTGGGAGAAGCTGGACGACTACGTGTACTACATACGAGCGTTCGGCAACACCATAGAGTTCTGTTTCGGTATCTTCCTGTTCTTCAACGGCGCCTGGATATTGCTGTTCGAGTCGGGCGGCGCCATCCGCGCGGTCATGATGTGCATACACGCGTACTTCAACATCTGGTGCGAGGCGAGGGCCGGCTGGTCGGTGTTCATGAAGCGGCGCACGGCCGTCAACAAGATAAACTCGCTGAAGGAGGCCTCCGCGGACCAGCTCCACCGACTGGACGACGTCTGCGCGATCTGCTACCAGGAGATGCACTCGGCCAAGATAACGAGGTGCAACCACTTCTTCCACGGCGTCTGTCTCAGGAAGTGGCTATACGTCCAGGACAGGTGTCCGCTGTGCCACGACATCCTGTACAAGATAGACAACGACCCGAACAAGGACAACGGCTCGGAGGCAGCCAACGAGGAGAACAGCAACAACCAGAACCTGCTGCTCGAAGACGAACCCGACCTCCTGTTGAACGACGTGAGGTGA

Protein sequence:

>DPOGS213227-PA
MSLRSKALALVEVLLRVPPLFVVDEFLKISLGLPVSTGEEVSLLSNVTIDHVDITDADGNYYDSNFYNTFVFTLVKFFVCCLGCMTALCIFVLYTKHLIIVYLYLMSLGIVFVSYWTNVSAIKQIQTLIQTATTPHSASILEDILDLNLKRLLDLEGPGILVIQNFAIQFILSVLFRNVHLGPRHPTIQKLLPLSFMAPSFLAMLPVSQNVLHHSPVFSSLLPLVLVQYAIWASSYDVIQVIYAGYQHGRLFVSHNGLSALVETEWMRLNVPCVLRVFWVMRVAEHAILLLMETYDDEGDEGLKVSTLLAVQSLASMAKSLLVTGCETITAVLGMTSVISFFCHYIGNFFQWILLTEEEEDKSIGTVSAILFYILALQTGLTSLNPEKRFIRLCRNFCLLFTALLHFLHNIVNPMLMSLSAAHNPSTHRHVRALGVCAFLIIFPISLLVYLWSQHSISTWLLAVSVFSIEVIVKVIVSLMIYSLFLFDAYRSTFWEKLDDYVYYIRAFGNTIEFCFGIFLFFNGAWILLFESGGAIRAVMMCIHAYFNIWCEARAGWSVFMKRRTAVNKINSLKEASADQLHRLDDVCAICYQEMHSAKITRCNHFFHGVCLRKWLYVQDRCPLCHDILYKIDNDPNKDNGSEAANEENSNNQNLLLEDEPDLLLNDVR-