DPOGS213236 | ||
---|---|---|
Transcript | DPOGS213236-TA | 537 bp |
Protein | DPOGS213236-PA | 178 aa |
Genomic position | DPSCF300124 - 495267-495952 | |
RNAseq coverage | 0x (Rank: top 99%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL006416 | 1e-57 | 71.71% |   |
Bombyx | BGIBMGA009514-TA | 4e-60 | 69.43% |   |
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_B0VZ37 | 1e-30 | 44.24% | Malate synthase n=5 Tax=Endopterygota RepID=B0VZ37_CULQU |
NCBI RefSeq | XP_315354.4 | 1e-37 | 46.99% | AGAP005342-PA [Anopheles gambiae str. PEST] |
NCBI nr blastp | gi|158294025 | 2e-36 | 46.99% | AGAP005342-PA [Anopheles gambiae str. PEST] |
NCBI nr blastx | gi|158294025 | 1e-34 | 47.56% | AGAP005342-PA [Anopheles gambiae str. PEST] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006097 | 1.5e-29 | glyoxylate cycle | |
GO:0004474 | 1.5e-29 | malate synthase activity | ||
GO:0003824 | 3.1e-12 | catalytic activity | ||
KEGG pathway | cqu:CpipJ_CPIJ000005 | 6e-31 |   | |
  | K01638 (E2.3.3.9, aceB, glcB) | maps-> | Pyruvate metabolism | |
  |   |   | Glyoxylate and dicarboxylate metabolism | |
InterPro domain | [13-158] IPR001465 | 1.5e-29 | Malate synthase | |
[14-158] IPR011076 | 3.1e-12 | Malate synthase-like | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS213236-TA
ATGACTGGTGTTCTATTATTGCAATCTTCGCCACCGAAATTACAAGATGTGCAAAAGAAAATATTTAGTAAAGATGCATTGAATTTCATAGCAAACCTTCACAGAGAATTTGATACCAGAATTGATAAACTTTACAATGAACGTTTGCGGCGTTCTGCTATAAAGTTCGCTGAGGGTCTAAATTTTAAAGTTTCTCCAGAACGTAATGATAAAAGTTGGAAAGTTGGTCCTTTACCAATAAGGCTTCAAAACCGTCACTTAGATTTAGGTGATGTTTCGGCATCCAACACAGCACATTTCACCGCAGCTTTAAAAGCAGATGTTCAAGGAGTGCAGGTCGACTTTGATGATGGTCATTGTCCCACATGGAGGAACCAATTATTGGCATTTAATAATATGTGTTTGGCTGTTCATGACAAACTTCAGGGAGCTCCCATTAGTATAGCAACCTGCCTAGTTCTTATGTTTAGACCTAAATTGAAATTCAACTTATTCTCAACTGAAAGAAGTGTACCATATGGGGTTATTGTTCTTTAA
>DPOGS213236-PA
MTGVLLLQSSPPKLQDVQKKIFSKDALNFIANLHREFDTRIDKLYNERLRRSAIKFAEGLNFKVSPERNDKSWKVGPLPIRLQNRHLDLGDVSASNTAHFTAALKADVQGVQVDFDDGHCPTWRNQLLAFNNMCLAVHDKLQGAPISIATCLVLMFRPKLKFNLFSTERSVPYGVIVL-