| DPOGS213270 | ||
|---|---|---|
| Transcript | DPOGS213270-TA | 237 bp |
| Protein | DPOGS213270-PA | 78 aa |
| Genomic position | DPSCF300264 - 38927-39306 | |
| RNAseq coverage | 482x (Rank: top 26%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016664 | 1e-36 | 87.18% | |
| Bombyx | BGIBMGA001186-TA | 4e-34 | 80.77% | |
| Drosophila | Srp9-PA | 1e-17 | 46.75% | |
| EBI UniRef50 | UniRef50_D6WEI1 | 2e-21 | 58.97% | Signal recognition particle 9 kDa protein n=2 Tax=Endopterygota RepID=D6WEI1_TRICA |
| NCBI RefSeq | NP_001091816.1 | 2e-32 | 80.77% | signal recognition particle 9 kDa protein [Bombyx mori] |
| NCBI nr blastp | gi|148298835 | 5e-31 | 80.77% | signal recognition particle 9 kDa protein [Bombyx mori] |
| NCBI nr blastx | gi|148298835 | 5e-30 | 80.77% | signal recognition particle 9 kDa protein [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006614 | 7.8e-45 | SRP-dependent cotranslational protein targeting to membrane | |
| GO:0045900 | 7.8e-45 | negative regulation of translational elongation | ||
| GO:0048500 | 7.8e-45 | signal recognition particle | ||
| GO:0008312 | 7.8e-45 | 7S RNA binding | ||
| KEGG pathway | nvi:100118051 | 3e-24 | ||
| K03109 (SRP9) | maps-> | Protein export | ||
| InterPro domain | [1-78] IPR008832 | 7.8e-45 | Signal recognition particle, SRP9 subunit | |
| [3-77] IPR009018 | 3.7e-29 | Signal recognition particle, SRP9/SRP14 subunit | ||
| Orthology group | MCL11793 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213270-TA
ATGACTTTAATAACGATCTGGGAAGAGTTTGAGAAATCAGCAGAAATGTTATATTTAAGGGATCCGCTTAACACTCGGTATAGTCTCAAATATTCACATTCCAAAGGAATCGTTATAGTAAAAATTACGGACAACAAAAAGTGTCTCCTGTACAAAACAGAAGTTCAACAAGATGTTAGAAAGATAGATAACTTTATATCAAACTTAATACGACACATGGCATCCAATGATAACTAG
>DPOGS213270-PA
MTLITIWEEFEKSAEMLYLRDPLNTRYSLKYSHSKGIVIVKITDNKKCLLYKTEVQQDVRKIDNFISNLIRHMASNDN-