Monarch geneset OGS2.0

DPOGS213284
TranscriptDPOGS213284-TA801 bp
ProteinDPOGS213284-PA224 aa
Genomic positionDPSCF300429 - 8249-11659
RNAseq coverage284x (Rank: top 39%)
Annotation
HeliconiusHMEL0160896e-12595.56% 
BombyxBGIBMGA001806-TA2e-12394.71% 
DrosophilaCG3689-PC9e-10888.24% 
EBI UniRef50UniRef50_O438093e-9785.00%Cleavage and polyadenylation specificity factor subunit 5 n=107 Tax=Bilateria RepID=CPSF5_HUMAN
NCBI RefSeqNP_001040354.15e-12294.71%cleavage and polyadenylation specific factor 5 [Bombyx mori]
NCBI nr blastpgi|1140515288e-12194.71%cleavage and polyadenylation specific factor 5 [Bombyx mori]
NCBI nr blastxgi|1140515283e-12194.71%cleavage and polyadenylation specific factor 5 [Bombyx mori]
Group
KEGG pathwaygga:4156972e-90 
 K10636 (AMFR, GP78)maps-> Protein processing in endoplasmic reticulum
InterPro domain[5-225] IPR0167061.2e-118Cleavage/polyadenylation specificity factor, 25kDa subunit
Orthology groupMCL11931 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213284-TA
ATGGCGGCAGTACAAGGCGCTCCTAATAAACAATGGCCCGCCAGACCCGGTGTGCAACATCAAAACAGTCAGAATGCAAGTGTAACATTAAACAGAACGATAAATCTCTACCCGCTAACAAATTACACATTTGGAACGAAAGAACCACTGTTTGAAAAAGATGCTTCCGTACCAGCTAGGTTCCAGAGAATGAGAGAGGAATTCGCGAAAATTGGCATGCGAAGGTCCGTCGAAGGTGTCCTCCTCGTTCATGAACACGGCTTACCTCATGTGCTACTCCTTCAATTAGGAACGGCCTTCTTCAAACTTCCCGGCGGAGAGCTGAATCCCGGAGAAGACGAGATCGAGGGCCTGAAGAGACTTCTCACAGAGACCCTTGGACGGCAGGACGGTGTCAAGCAGGAATGGCTCATAGAAGACACCATCGGCAACTGGTGGAGGCCCAACTTCGAGCCGCCCCAATATCCTTATATACCGCCCCACATCACCAAACCGAAGGAGCACAAGCGCTTGTTCCTCGTGCAGCTTCAAGACAGAGCGCTGTTCGCTGTCCCCAAGAACTACAAACTAGTCGCAGCGCCTCTGTTTGAGTTGTATGACAATGCACAAGGCTACGGACCTATTATATCATCGTTGTCACAGAGCCTGTGCAGATTTAACTTTACTTATATGTAATATATATATATATATATTGCACACACACAAACACACACACACATATACACATATATATATGTGTGATTTGGGTCGGTTTGTAAGTTATATATTTATATGAATTTAACATGGCATAGTGTTATATAA

Protein sequence:

>DPOGS213284-PA
MAAVQGAPNKQWPARPGVQHQNSQNASVTLNRTINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFAKIGMRRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGGELNPGEDEIEGLKRLLTETLGRQDGVKQEWLIEDTIGNWWRPNFEPPQYPYIPPHITKPKEHKRLFLVQLQDRALFAVPKNYKLVAAPLFELYDNAQGYGPIISSLSQSLCRFNFTYM-