| DPOGS213302 | ||
|---|---|---|
| Transcript | DPOGS213302-TA | 942 bp |
| Protein | DPOGS213302-PA | 313 aa |
| Genomic position | DPSCF300130 - 527316-528841 | |
| RNAseq coverage | 630x (Rank: top 20%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010834 | 1e-90 | 51.27% | |
| Bombyx | BGIBMGA002878-TA | 3e-20 | 27.38% | |
| Drosophila | CG2681-PA | 2e-19 | 26.12% | |
| EBI UniRef50 | UniRef50_D6WZ00 | 8e-28 | 30.13% | Putative uncharacterized protein n=1 Tax=Tribolium castaneum RepID=D6WZ00_TRICA |
| NCBI RefSeq | XP_975517.1 | 2e-25 | 29.32% | PREDICTED: similar to GA15427-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|270012581 | 3e-27 | 30.13% | hypothetical protein TcasGA2_TC006740 [Tribolium castaneum] |
| NCBI nr blastx | gi|270012581 | 5e-27 | 29.71% | hypothetical protein TcasGA2_TC006740 [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 1.4e-32 | nucleus | |
| GO:0006511 | 1.4e-32 | ubiquitin-dependent protein catabolic process | ||
| GO:0007275 | 1.4e-32 | multicellular organismal development | ||
| GO:0005515 | 4.3e-19 | protein binding | ||
| GO:0016567 | 1.2e-09 | protein ubiquitination | ||
| GO:0008270 | 1.2e-09 | zinc ion binding | ||
| GO:0004842 | 1.2e-09 | ubiquitin-protein ligase activity | ||
| KEGG pathway | tca:100142282 | 6e-23 | ||
| K04506 (SIAH1) | maps-> | Ubiquitin mediated proteolysis | ||
| Wnt signaling pathway | ||||
| p53 signaling pathway | ||||
| InterPro domain | [13-249] IPR004162 | 1.4e-32 | Seven-in-absentia protein, sina | |
| [62-253] IPR018121 | 3.2e-19 | Seven-in-absentia protein, TRAF-like domain | ||
| [73-262] IPR008974 | 4.3e-19 | TRAF-like | ||
| [79-129] IPR013323 | 1.2e-09 | Seven In Absentia Homolog-type | ||
| [5-78] IPR013083 | 2.2e-08 | Zinc finger, RING/FYVE/PHD-type | ||
| Orthology group | MCL20247 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213302-TA
ATGGCGAAAGCGAAGGTTAACCAGAAAATGGGACCAGTTGTTGAGTTGCCTGAATGTCCAATTTGCTTGGACACCATGTCAGCTCCAATATTCCAATGTCAATCAGGGCACAGTCTCTGCAGCTCTTGTACTAAAGCGTTGATGCCTCCTATATGTCCATTGTGCCGTCAAGCAATGACTCAAGTGAGAAATTGGCAGCTTGAGGATTTGTTATTAAAGGCTACTATGAACTGTCCAAATAGGATCATAGGTTGTGCTTATACAACTGTTGCATCAAATATGGAAAACCACATCAAAGAATGTATTTATCGAGAGATGATTTGCCCTCTTCATGTATTTGGCAGATGTTCCTGGTCAGGAAAACTAAAGGAAATGTTAGATCACTTTAAAGAACACCATTCTCAGAATTTGATTATGACTATGGATCAGAAAGTGACCATTAATAATCTTAACATTAATGAAGATGATCGCTTTGTGTACATTATGCCACAAGGTAAAATGATGTTCATAGTAACATTGAAAATTGATACAAAATTGAAATTAGCATTTTTTGCCGTACAACTTATAGCTTGTCAGAAAATTGCACAACAACATGTTTATGAATTAAGTATAACTAGTTTGCAAGACAAGGAAAGAAGAGTCAATTATTTTGATCACTGCTTTAGTGACGCAACGGAAACGAGAGAGATATTGCAATCAGCAAAATGTTGTGTTATGTCTCTAAGCATGCTGGGAAATTTCATTAACAAGAAATCATTATCATTCTCTTTGAATGTGCAAAGACTGAGACCAAACTATCAAAGAGAACCAAATAAAAATATTCATCAAGTTAATCCAAATGTTGCTAAGAATCGACAAAATTTTAGAGGTAAAAGTCCCTCAGCTGTAACTCACGGTCCCAATAGACCCAAAGGTCCATGGAAGAAACCTATTAATCAATAA
>DPOGS213302-PA
MAKAKVNQKMGPVVELPECPICLDTMSAPIFQCQSGHSLCSSCTKALMPPICPLCRQAMTQVRNWQLEDLLLKATMNCPNRIIGCAYTTVASNMENHIKECIYREMICPLHVFGRCSWSGKLKEMLDHFKEHHSQNLIMTMDQKVTINNLNINEDDRFVYIMPQGKMMFIVTLKIDTKLKLAFFAVQLIACQKIAQQHVYELSITSLQDKERRVNYFDHCFSDATETREILQSAKCCVMSLSMLGNFINKKSLSFSLNVQRLRPNYQREPNKNIHQVNPNVAKNRQNFRGKSPSAVTHGPNRPKGPWKKPINQ-