| DPOGS213318 | ||
|---|---|---|
| Transcript | DPOGS213318-TA | 435 bp |
| Protein | DPOGS213318-PA | 144 aa |
| Genomic position | DPSCF300341 - 97490-98456 | |
| RNAseq coverage | 153x (Rank: top 53%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010561 | 1e-53 | 63.89% | |
| Bombyx | BGIBMGA009501-TA | 2e-44 | 54.86% | |
| Drosophila | CG34120-PC | 5e-10 | 25.38% | |
| EBI UniRef50 | UniRef50_UPI00021A8884 | 2e-26 | 42.64% | UPI00021A8884 related cluster n=1 Tax=unknown RepID=UPI00021A8884 |
| NCBI RefSeq | XP_394305.3 | 3e-26 | 41.09% | PREDICTED: similar to ATP-binding cassette, sub-family A (ABC1), member 1 [Apis mellifera] |
| NCBI nr blastp | gi|350415606 | 7e-26 | 42.64% | PREDICTED: hypothetical protein LOC100745943 [Bombus impatiens] |
| NCBI nr blastx | gi|350415606 | 7e-25 | 42.64% | PREDICTED: hypothetical protein LOC100745943 [Bombus impatiens] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | mmu:74591 | 4e-11 | ||
| K05646 (ABCA12) | maps-> | ABC transporters | ||
| Orthology group | MCL20741 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213318-TA
ATGGCGGCTCCGCTGCAGGCTCGGCTGCTACTATGGAAGGACTACCTCATACGGAAAAGGAAACCGATAACACTCTCAGGAGTAGCATGGGCCACTCTTGTAATGCTGAGCTTATACGTAGTTAGGATCAACGTAGATAATACAGAATATCCCACGTGTCAATTCGCAGCGCGGGCGCTCCCAAGTGCTGGATTACTTAATTTTCTCCAATCATTCATATGTAATGTCAATAATGAATGCAATGAATTGGATAAGTTCGAAGAAATACCAGCCTATGAAAAATCCAGCTTCAGCAAACTCCAACGCGAGTTGTCAGGAGTCATCGAAGAACCGCGCGCTCTGAATGCTGTCGGGGCTATGTCACACGCGGCCAGAATCCTCTCCAGCCTGGCGAATGTCGCTGATAACTCTCTTCTTCTTAATATAACACGTTAG
>DPOGS213318-PA
MAAPLQARLLLWKDYLIRKRKPITLSGVAWATLVMLSLYVVRINVDNTEYPTCQFAARALPSAGLLNFLQSFICNVNNECNELDKFEEIPAYEKSSFSKLQRELSGVIEEPRALNAVGAMSHAARILSSLANVADNSLLLNITR-