DPOGS213357 | ||
---|---|---|
Transcript | DPOGS213357-TA | 633 bp |
Protein | DPOGS213357-PA | 210 aa |
Genomic position | DPSCF300109 - 135623-137911 | |
RNAseq coverage | 886x (Rank: top 14%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL016387 | 3e-47 | 64.86% |   |
Bombyx | % |   | ||
Drosophila | Vps28-PA | 1e-87 | 69.71% |   |
EBI UniRef50 | UniRef50_Q9UK41 | 5e-80 | 68.29% | Vacuolar protein sorting-associated protein 28 homolog n=99 Tax=Metazoa RepID=VPS28_HUMAN |
NCBI RefSeq | XP_001663849.1 | 3e-90 | 75.96% | hypothetical protein AaeL_AAEL013658 [Aedes aegypti] |
NCBI nr blastp | gi|157128280 | 5e-89 | 75.96% | hypothetical protein AaeL_AAEL002324 [Aedes aegypti] |
NCBI nr blastx | gi|157128280 | 1e-85 | 75.96% | hypothetical protein AaeL_AAEL002324 [Aedes aegypti] |
Group | ||||
---|---|---|---|---|
KEGG pathway | aag:AaeL_AAEL013658 | 8e-90 |   | |
  | K12184 (VPS28) | maps-> | Endocytosis | |
InterPro domain | [1-210] IPR007143 | 1.3e-132 | Vacuolar protein sorting-associated, VPS28 | |
Orthology group | MCL12069 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS213357-TA
ATGCAAGATACGAGACCAGAGTTATATGAGGAGGTGAAGCTGTACAGAAATGCCAGGGAGAGAGAAAAGCATGACAACATGGCCGAACTCTATGCTGTGGTCAGCACCCTTCAACATCTAGAAAAAGCTTACATGCGGGACTGTGTGCGTGCACAGGAGTACACTGCTGCCTGCAGTCGGTTACTCGTACAATACAGAGTAGCCTTCAAGCAAGTTACCGGAGAAGAGTTCCCAAATATTGAGGCATTTGTTACAAAATTCAGGTTAGATTGTCCGGCGGCATTAGAGAGGATAAGGGAGAACAAACCAAACCTGATTAAAGATGACAAAGGGAACACTAATAAATATATCGCTGAAATTGTATCGCTGTTCATAACGTTGATGGATAAGTTGCGCCTGGAATTCCGCGCCATGGACATGATCCAGCCAGAGTTACGTGACCTCCGGGACACCATGGAACGTCTCACCATGCTGCCTGATGACTTCGAGGGGAAGCTCAAGGTCCAAGAATGGCTGGACAAGCTGTCGGAGATGTCGGCTTCAGATGAACTATCAGAGTCCCAAGTGCGACAGCTGCTGTTTGACCTGGAAACTTCATATGGAGCGTTCAACAAACTACTCCACAAGGATTGA
>DPOGS213357-PA
MQDTRPELYEEVKLYRNAREREKHDNMAELYAVVSTLQHLEKAYMRDCVRAQEYTAACSRLLVQYRVAFKQVTGEEFPNIEAFVTKFRLDCPAALERIRENKPNLIKDDKGNTNKYIAEIVSLFITLMDKLRLEFRAMDMIQPELRDLRDTMERLTMLPDDFEGKLKVQEWLDKLSEMSASDELSESQVRQLLFDLETSYGAFNKLLHKD-