DPOGS213485 | ||
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Transcript | DPOGS213485-TA | 525 bp |
Protein | DPOGS213485-PA | 174 aa |
Genomic position | DPSCF300100 + 192144-192770 | |
RNAseq coverage | 130x (Rank: top 56%) |
Annotation | ||||
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Heliconius | HMEL016850 | 8e-72 | 96.92% |   |
Bombyx | BGIBMGA004367-TA | 6e-65 | 89.31% |   |
Drosophila | Sox15-PA | 5e-20 | 88.89% |   |
EBI UniRef50 | UniRef50_B3MCY6 | 4e-18 | 88.89% | GF12898 n=2 Tax=Sophophora RepID=B3MCY6_DROAN |
NCBI RefSeq | XP_974207.1 | 1e-20 | 65.17% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
NCBI nr blastp | gi|91086843 | 1e-19 | 65.17% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
NCBI nr blastx | gi|91086843 | 1e-18 | 57.69% | PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005515 | 1.7e-11 | protein binding | |
GO:0003677 | 1.9e-11 | DNA binding | ||
KEGG pathway | spu:587141 | 2e-15 |   | |
  | K04495 (SOX17) | maps-> | Wnt signaling pathway | |
InterPro domain | [75-130] IPR009071 | 1.7e-11 | High mobility group, superfamily | |
[94-131] IPR000910 | 1.9e-11 | High mobility group, HMG1/HMG2 | ||
Orthology group | MCL22067 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213485-TA
ATGATGGATTCTGGCGGCGCGGGTATAGAATCGCCACCCACCTACCACCGAAGCTACGAACAGTACGTCCAGGGGGCTGTAGAGACCAGCACGGACTCTGGCCAGGATCAGACCAGCCCGGAGCTCGTCGTGTGGTCTACGTTACCATACGGTCTGGACTATAGAGCGCAATACGACTACAGAAGTCCCTATGATACCTCAAGGGATTACTCCTCACAGCAATACGCTAGAGCGCCCTTCACAACAAAGATGGGTCAGGCCAAAGCCTTAAAGGAAGCCAGGATACGAAGACCTATGAATGCTTTCATGGTGTGGGCGAAGGTGGAGCGGAAGAAGCTGGCTGATGAGAACCCGGATCTCCATAACGCTGACTTAAGTAAAATGCTAGGATATTTATTATTCCGTATTCGGGAAGCAAAAAACGCTTCGTTGTTTAAAATAAACGCGTTAAAAAGTACAAAAGCAGTTAAACCCTTGCTCGTGAGTCAGCACAAACGACCAATCTTCGGAAGATTTGAATTTTAA
>DPOGS213485-PA
MMDSGGAGIESPPTYHRSYEQYVQGAVETSTDSGQDQTSPELVVWSTLPYGLDYRAQYDYRSPYDTSRDYSSQQYARAPFTTKMGQAKALKEARIRRPMNAFMVWAKVERKKLADENPDLHNADLSKMLGYLLFRIREAKNASLFKINALKSTKAVKPLLVSQHKRPIFGRFEF-