Monarch geneset OGS2.0

DPOGS213531
TranscriptDPOGS213531-TA1020 bp
ProteinDPOGS213531-PA339 aa
Genomic positionDPSCF300033 - 628546-631645
RNAseq coverage3x (Rank: top 91%)
Annotation
HeliconiusHMEL0078990.092.63% 
BombyxBGIBMGA005107-TA1e-9351.52% 
Drosophilaspn-A-PA4e-8552.26% 
EBI UniRef50UniRef50_Q145659e-15779.51%Meiotic recombination protein DMC1/LIM15 homolog n=154 Tax=Eukaryota RepID=DMC1_HUMAN
NCBI RefSeqNP_001037552.10.092.63%Dmc1 homolog [Bombyx mori]
NCBI nr blastpgi|1129827650.092.63%Dmc1 homolog [Bombyx mori]
NCBI nr blastxgi|1129827656e-17692.63%Dmc1 homolog [Bombyx mori]
Group
Gene OntologyGO:00056349.1e-165nucleus
GO:00036779.1e-165DNA binding
GO:00071319.1e-165reciprocal meiotic recombination
GO:00055249.1e-165ATP binding
GO:00080949.1e-165DNA-dependent ATPase activity
GO:00001661.2e-15nucleotide binding
GO:00171118.5e-06nucleoside-triphosphatase activity
KEGG pathwaytgu:1002243912e-158 
 K10872 (DMC1)maps-> Meiosis - yeast
InterPro domain[2-339] IPR0164673.2e-186DNA recombination and repair protein, RecA-like
[23-337] IPR0119409.1e-165Meiotic recombinase Dmc1
[78-337] IPR0136329.6e-124DNA recombination and repair protein Rad51, C-terminal
[14-83] IPR0109951.2e-15DNA repair Rad51/transcription factor NusA, alpha-helical
[117-306] IPR0035938.5e-06ATPase, AAA+ type, core
Orthology groupMCL18907 Patchy
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213531-TA
ATGTTGGAACAAACACTAGATGATAATATTTCTGAAAATGACGAAGAAGAAATTTTCTTTCAAGATGTGGATACTTTACAAAAGCATGGTATTAATGTAGCAGATATTAAAAAGTTAAAAGGTGCTGGCATTTGTACTATAAAAGGAATCCAAATGACTACTAAAAAGAAGCTTTGTAATATAAAAGGATTTTCTGATGCGAAAGTAGAAAAAATAAAGGAAGCTTGTTTAAAAGTCGTCTCTTTAGGTTTTATGACCGCTCTAGAAGTCAGTGATAAACGGAAGCATGTTTTTAAAATAAGTACTGGTAGTAGCGAGTTTGATAAACTTTTGGCTGGAGGTATAGAATCAATGTCTATAACGGAAGTATTCGGCGAATTCCGAACTGGCAAAACTCAATTATCTCATACTCTTTGCGTTACGACACAAATCCCCAATTCCTCTGGCTACAGTGGTGGCAAGGTCATGTTTCTAGACACTGAACACACTTTCCGTCCTGATAGGTTGAGACCCATTGCGGACAGATTTAATCTAGAACAAAACGCTGTACTGGACAACGTTTTATACGCGAGAGCTTATACATCGGAACACCAGGCGGAACTGCTAGACTTTGTAGCTGCTAAGTTCCACGAAGAGGCCGGCGTGTTCAAACTACTGATCATAGATTCAGTCATGGCGTTGTTTAGAGTGGACTTCTCGGGGCGCGGGGAACTGGCGGATAGACAACAGAAACTCGCACAAGTGCTCTCACGCCTGCAAAAGATATCCGAAGAGTATAATGTTGCTGTTTTTATAACAAATCAGATGACGGCAGACCCTGGTGCCACATTATCATTCCAAGCTGATCCAAAGAAGCCCATAGGTGGTAATATCCTGGCTCACGCGTCAACCACAAGGATATATCTTAGAAAGGGAAGGGGCGAAAATAGAATCGCCAAAATATATGATTCCCCAGATTTACCTGAAAGCGAAGTTACCTTTGCCATCACTAATGGTGGTGTCGCTGACTCTAAAGATTAA

Protein sequence:

>DPOGS213531-PA
MLEQTLDDNISENDEEEIFFQDVDTLQKHGINVADIKKLKGAGICTIKGIQMTTKKKLCNIKGFSDAKVEKIKEACLKVVSLGFMTALEVSDKRKHVFKISTGSSEFDKLLAGGIESMSITEVFGEFRTGKTQLSHTLCVTTQIPNSSGYSGGKVMFLDTEHTFRPDRLRPIADRFNLEQNAVLDNVLYARAYTSEHQAELLDFVAAKFHEEAGVFKLLIIDSVMALFRVDFSGRGELADRQQKLAQVLSRLQKISEEYNVAVFITNQMTADPGATLSFQADPKKPIGGNILAHASTTRIYLRKGRGENRIAKIYDSPDLPESEVTFAITNGGVADSKD-