DPOGS213531 | ||
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Transcript | DPOGS213531-TA | 1020 bp |
Protein | DPOGS213531-PA | 339 aa |
Genomic position | DPSCF300033 - 628546-631645 | |
RNAseq coverage | 3x (Rank: top 91%) |
Annotation | ||||
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Heliconius | HMEL007899 | 0.0 | 92.63% |   |
Bombyx | BGIBMGA005107-TA | 1e-93 | 51.52% |   |
Drosophila | spn-A-PA | 4e-85 | 52.26% |   |
EBI UniRef50 | UniRef50_Q14565 | 9e-157 | 79.51% | Meiotic recombination protein DMC1/LIM15 homolog n=154 Tax=Eukaryota RepID=DMC1_HUMAN |
NCBI RefSeq | NP_001037552.1 | 0.0 | 92.63% | Dmc1 homolog [Bombyx mori] |
NCBI nr blastp | gi|112982765 | 0.0 | 92.63% | Dmc1 homolog [Bombyx mori] |
NCBI nr blastx | gi|112982765 | 6e-176 | 92.63% | Dmc1 homolog [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0005634 | 9.1e-165 | nucleus | |
GO:0003677 | 9.1e-165 | DNA binding | ||
GO:0007131 | 9.1e-165 | reciprocal meiotic recombination | ||
GO:0005524 | 9.1e-165 | ATP binding | ||
GO:0008094 | 9.1e-165 | DNA-dependent ATPase activity | ||
GO:0000166 | 1.2e-15 | nucleotide binding | ||
GO:0017111 | 8.5e-06 | nucleoside-triphosphatase activity | ||
KEGG pathway | tgu:100224391 | 2e-158 |   | |
  | K10872 (DMC1) | maps-> | Meiosis - yeast | |
InterPro domain | [2-339] IPR016467 | 3.2e-186 | DNA recombination and repair protein, RecA-like | |
[23-337] IPR011940 | 9.1e-165 | Meiotic recombinase Dmc1 | ||
[78-337] IPR013632 | 9.6e-124 | DNA recombination and repair protein Rad51, C-terminal | ||
[14-83] IPR010995 | 1.2e-15 | DNA repair Rad51/transcription factor NusA, alpha-helical | ||
[117-306] IPR003593 | 8.5e-06 | ATPase, AAA+ type, core | ||
Orthology group | MCL18907 |   | Patchy |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213531-TA
ATGTTGGAACAAACACTAGATGATAATATTTCTGAAAATGACGAAGAAGAAATTTTCTTTCAAGATGTGGATACTTTACAAAAGCATGGTATTAATGTAGCAGATATTAAAAAGTTAAAAGGTGCTGGCATTTGTACTATAAAAGGAATCCAAATGACTACTAAAAAGAAGCTTTGTAATATAAAAGGATTTTCTGATGCGAAAGTAGAAAAAATAAAGGAAGCTTGTTTAAAAGTCGTCTCTTTAGGTTTTATGACCGCTCTAGAAGTCAGTGATAAACGGAAGCATGTTTTTAAAATAAGTACTGGTAGTAGCGAGTTTGATAAACTTTTGGCTGGAGGTATAGAATCAATGTCTATAACGGAAGTATTCGGCGAATTCCGAACTGGCAAAACTCAATTATCTCATACTCTTTGCGTTACGACACAAATCCCCAATTCCTCTGGCTACAGTGGTGGCAAGGTCATGTTTCTAGACACTGAACACACTTTCCGTCCTGATAGGTTGAGACCCATTGCGGACAGATTTAATCTAGAACAAAACGCTGTACTGGACAACGTTTTATACGCGAGAGCTTATACATCGGAACACCAGGCGGAACTGCTAGACTTTGTAGCTGCTAAGTTCCACGAAGAGGCCGGCGTGTTCAAACTACTGATCATAGATTCAGTCATGGCGTTGTTTAGAGTGGACTTCTCGGGGCGCGGGGAACTGGCGGATAGACAACAGAAACTCGCACAAGTGCTCTCACGCCTGCAAAAGATATCCGAAGAGTATAATGTTGCTGTTTTTATAACAAATCAGATGACGGCAGACCCTGGTGCCACATTATCATTCCAAGCTGATCCAAAGAAGCCCATAGGTGGTAATATCCTGGCTCACGCGTCAACCACAAGGATATATCTTAGAAAGGGAAGGGGCGAAAATAGAATCGCCAAAATATATGATTCCCCAGATTTACCTGAAAGCGAAGTTACCTTTGCCATCACTAATGGTGGTGTCGCTGACTCTAAAGATTAA
>DPOGS213531-PA
MLEQTLDDNISENDEEEIFFQDVDTLQKHGINVADIKKLKGAGICTIKGIQMTTKKKLCNIKGFSDAKVEKIKEACLKVVSLGFMTALEVSDKRKHVFKISTGSSEFDKLLAGGIESMSITEVFGEFRTGKTQLSHTLCVTTQIPNSSGYSGGKVMFLDTEHTFRPDRLRPIADRFNLEQNAVLDNVLYARAYTSEHQAELLDFVAAKFHEEAGVFKLLIIDSVMALFRVDFSGRGELADRQQKLAQVLSRLQKISEEYNVAVFITNQMTADPGATLSFQADPKKPIGGNILAHASTTRIYLRKGRGENRIAKIYDSPDLPESEVTFAITNGGVADSKD-