Monarch geneset OGS2.0

DPOGS213606
TranscriptDPOGS213606-TA639 bp
ProteinDPOGS213606-PA212 aa
Genomic positionDPSCF300033 + 740646-750970
RNAseq coverage58x (Rank: top 69%)
Annotation
HeliconiusHMEL0136763e-6389.84% 
BombyxBGIBMGA011668-TA5e-6576.65% 
DrosophilaSox100B-PA5e-2852.63% 
EBI UniRef50UniRef50_F5BAR01e-8475.23%SoxE n=2 Tax=Obtectomera RepID=F5BAR0_BOMMO
NCBI RefSeqXP_001122993.13e-3456.49%PREDICTED: similar to SRY-box containing gene 10 [Apis mellifera]
NCBI nr blastpgi|3796989084e-8475.23%SoxE [Bombyx mori]
NCBI nr blastxgi|3796989087e-8874.77%SoxE [Bombyx mori]
Group
Gene OntologyGO:00036777.5e-30DNA binding
GO:00055153.5e-28protein binding
KEGG pathway 
InterPro domain[44-121] IPR0009107.5e-30High mobility group, HMG1/HMG2
[25-117] IPR0090713.5e-28High mobility group, superfamily
Orthology groupMCL18377 Insect specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213606-TA
ATGAGCTGGGATCAGGACAGACCCGAGAAGCTGGAGATCAATGAAGCTGTCGGCAAGCTGCTGCAGTCATTCAACTATGATACTATCGTGCCGCAGCCCAGCAAGGGCGGCGGTTGCATGCGGCGGGCTCATGTGAAGCGCCCCATGAATGCTTTCATGGTGTTCGCACAGGCAATGCGTCGTAGGTTGTCTGAACAACGGCCGTCACTGCACAACGCTGAACTGAGCAAATCCCTGGGATCCATGTGGAAGAGCTTGAGCGAAATGGAAAAGCTACCGTTTGTTAAGGAAGCCGAAAAACTACGGACTCAGCACAAACGTGAGTACCCCGACTATAAATACCAACCTAGACGTCGCAAGCCACCGCCTACAGCATCCACGAGACTAAAACGGGAACCTACACCAGAAAGATCTCAAATCGATTTCTCCCGCATCGAAGTCGATGGCGCCTTACTAGCTGACGGACCGCCAGATGGCGCTGAGCTCGACCAGTATCTGAAACCAGTACCAGTGCCGGACTACCACGAGATGCAGCCACGCTACACCCACACCTTATCCCATCACCCACCAGGGCTGTATACCCCTGTGCCGTCACATTTACACCCTCCATGTGACTGGCAACACTACCCGCATCCATAA

Protein sequence:

>DPOGS213606-PA
MSWDQDRPEKLEINEAVGKLLQSFNYDTIVPQPSKGGGCMRRAHVKRPMNAFMVFAQAMRRRLSEQRPSLHNAELSKSLGSMWKSLSEMEKLPFVKEAEKLRTQHKREYPDYKYQPRRRKPPPTASTRLKREPTPERSQIDFSRIEVDGALLADGPPDGAELDQYLKPVPVPDYHEMQPRYTHTLSHHPPGLYTPVPSHLHPPCDWQHYPHP-