| DPOGS213657 | ||
|---|---|---|
| Transcript | DPOGS213657-TA | 483 bp |
| Protein | DPOGS213657-PA | 160 aa |
| Genomic position | DPSCF300435 - 20312-20794 | |
| RNAseq coverage | 1262x (Rank: top 10%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011784 | 4e-74 | 93.29% | |
| Bombyx | BGIBMGA010868-TA | 6e-67 | 82.10% | |
| Drosophila | vvl-PB | 2e-62 | 85.82% | |
| EBI UniRef50 | UniRef50_Q17237 | 5e-65 | 82.10% | Silk gland factor 3 n=61 Tax=Coelomata RepID=SGF3_BOMMO |
| NCBI RefSeq | NP_001037456.2 | 2e-65 | 82.10% | silk gland factor 3 [Bombyx mori] |
| NCBI nr blastp | gi|2495313 | 2e-64 | 82.10% | POU domain protein [Bombyx mori] |
| NCBI nr blastx | gi|40950582 | 2e-66 | 80.86% | POU-domain transcription factor [Helicoverpa armigera] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 4.4e-23 | DNA binding | |
| GO:0006355 | 4.4e-23 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 3.2e-20 | sequence-specific DNA binding | ||
| GO:0003700 | 3.2e-20 | sequence-specific DNA binding transcription factor activity | ||
| GO:0005515 | 1.8e-17 | protein binding | ||
| KEGG pathway | ||||
| InterPro domain | [15-91] IPR012287 | 4.4e-23 | Homeodomain-related | |
| [34-96] IPR001356 | 3.2e-20 | Homeobox | ||
| [33-107] IPR009057 | 1.8e-17 | Homeodomain-like | ||
| [33-53] IPR013847 | 9.9e-17 | POU | ||
| Orthology group | MCL13991 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213657-TA
ATGTGTAAATTGAAACCACTTTTGCAAAAATGGCTAGAGGAAGCCGACTCTACGACGGGTAGTCCGACTAGTATCGATAAAATAGCCGCCCAGGGTCGCAAGAGAAAGAAGCGAACATCCATCGAAGTGTCAGTGAAGGGTGCGCTAGAACAACACTTTCATAAGCAGCCAAAACCCTCCGCCCAAGAGATCACGAGTCTCGCAGATAGTTTACAACTAGAGAAGGAGGTAGTCAGAGTATGGTTTTGTAATCGTCGGCAAAAGGAAAAGAGGATGACGCCGCCGAACACGTTAGGCGGTGAGATGTTGGACGGAATGGGCCACGGGCACTACGGGCACGACGTGCATGGCTCACCACCGCTGCATGCTCACTCGCCGGCGCTGTCACCACACGCGCAGCACGGCCAGCACGCACCGCACGCGCCGCACTCGCAGCACCCGCAACACGGCCTCCAGAGCGCGCACACCCTAGCCGCACACTAA
>DPOGS213657-PA
MCKLKPLLQKWLEEADSTTGSPTSIDKIAAQGRKRKKRTSIEVSVKGALEQHFHKQPKPSAQEITSLADSLQLEKEVVRVWFCNRRQKEKRMTPPNTLGGEMLDGMGHGHYGHDVHGSPPLHAHSPALSPHAQHGQHAPHAPHSQHPQHGLQSAHTLAAH-