Monarch geneset OGS2.0

DPOGS213679
TranscriptDPOGS213679-TA858 bp
ProteinDPOGS213679-PA285 aa
Genomic positionDPSCF300219 - 169707-170640
RNAseq coverage262x (Rank: top 41%)
Annotation
HeliconiusHMEL0107562e-13581.18% 
BombyxBGIBMGA010316-TA2e-13175.96% 
DrosophilamRpL4-PA2e-8962.92% 
EBI UniRef50UniRef50_B4JAB38e-9457.93%GH11428 n=19 Tax=cellular organisms RepID=B4JAB3_DROGR
NCBI RefSeqXP_970941.12e-9860.58%PREDICTED: similar to mitochondrial 39S ribosomal protein L4 [Tribolium castaneum]
NCBI nr blastpgi|872483652e-12171.08%ribosomal protein L4 [Bombyx mori]
NCBI nr blastxgi|872483656e-11971.08%ribosomal protein L4 [Bombyx mori]
Group
Gene OntologyGO:00058406.7e-59ribosome
GO:00064126.7e-59translation
GO:00037356.7e-59structural constituent of ribosome
KEGG pathwayzma:1002809432e-36 
 K02926 (RP-L4, rplD)maps-> Ribosome
InterPro domain[50-283] IPR0130055.3e-112Ribosomal protein L4/L1e, bacterial-type
[60-267] IPR0235746.7e-59Ribosomal protein L4 domain
[76-266] IPR0021362.2e-53Ribosomal protein L4/L1e
Orthology groupMCL13948 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213679-TA
ATGAGTTCAGCGTTAATAAACGCTATTAAAAGGCTTAACATATCTGTCCTTCCTCAAATACGTTTCTGCTCATTAACAGCTAACTCAAGTTCCGCTATAAACGTTATTAATAACGAAGTTTCTGTCACCAAGAAAGAATGGAAGTTTCCACCATCGTATACAAAACCACGTGAAGTTTGGATTGAAAATTTGGATACAATTGAAGAAAAAAAAGTAGGATTATTTGAGCTTCATCCTTTAGTATACGCTGCAGCTCCCCGTATAGATATAATCCATAAAAATGTTGTTTGGCAAAGAAAGTATCGCTGGGTATCATGGGCCCACACTAAAACGCGGGCTGAAGTTAGGGGTGGAGGTAAAAAACCATGGCCCCAAAAGGGTCTGGGTCGAGCCCGGCATGGGTCTATTAGGTCACCACTATGGCGTGGAGGTGGTATCGCACATGGACCACGTTCTGGAAAAACTCACTTTTATATGTTAGATATATACTCAAGACTCCATGGCCTGACTTCAACATTATCAGCAAAGTTTGCACAAGATGATCTCCATGTTGTGAGAGATTTGGAACTACCTACTGATGAATCGGAATACCTCATTGAACTCATTGAGAAAAGAAATTGGGGTCCTTCAGTATTGCTTGTTGATGACACTGACTATGCTCCTCGGAACATAACGGTTGCAACGGACAGTTTACAATATGTAAACATCATGCCTGTATATGGACTCAATGTTTATTCTATGCTAAAGCACGATACTCTTGTTTTAACTCAGGCAGCTGCAGAAAAAATTGAAGAGAGAATTCTACATCACTTGAATTCTACTAAAGGTGTTAGCAAATTTAAATTAAGTCAAGTTTAA

Protein sequence:

>DPOGS213679-PA
MSSALINAIKRLNISVLPQIRFCSLTANSSSAINVINNEVSVTKKEWKFPPSYTKPREVWIENLDTIEEKKVGLFELHPLVYAAAPRIDIIHKNVVWQRKYRWVSWAHTKTRAEVRGGGKKPWPQKGLGRARHGSIRSPLWRGGGIAHGPRSGKTHFYMLDIYSRLHGLTSTLSAKFAQDDLHVVRDLELPTDESEYLIELIEKRNWGPSVLLVDDTDYAPRNITVATDSLQYVNIMPVYGLNVYSMLKHDTLVLTQAAAEKIEERILHHLNSTKGVSKFKLSQV-