| DPOGS213695 | ||
|---|---|---|
| Transcript | DPOGS213695-TA | 852 bp |
| Protein | DPOGS213695-PA | 283 aa |
| Genomic position | DPSCF300219 + 375151-376537 | |
| RNAseq coverage | 92x (Rank: top 62%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016431 | 1e-112 | 78.60% | |
| Bombyx | BGIBMGA010619-TA | 1e-64 | 61.71% | |
| Drosophila | Trf-PA | 5e-64 | 54.00% | |
| EBI UniRef50 | UniRef50_Q17JE5 | 4e-73 | 66.50% | TATA binding protein, putative n=1 Tax=Aedes aegypti RepID=Q17JE5_AEDAE |
| NCBI RefSeq | XP_001654561.1 | 8e-74 | 66.50% | TATA binding protein, putative [Aedes aegypti] |
| NCBI nr blastp | gi|157126257 | 2e-72 | 66.50% | TATA binding protein, putative [Aedes aegypti] |
| NCBI nr blastx | gi|157126257 | 3e-69 | 66.50% | TATA binding protein, putative [Aedes aegypti] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 5e-92 | DNA binding | |
| GO:0006355 | 5e-92 | regulation of transcription, DNA-dependent | ||
| GO:0006367 | 5e-92 | transcription initiation from RNA polymerase II promoter | ||
| GO:0005488 | 1.1e-29 | binding | ||
| KEGG pathway | aag:AaeL_AAEL002079 | 2e-73 | ||
| K03120 (TBP, tbp) | maps-> | Huntington's disease | ||
| Basal transcription factors | ||||
| InterPro domain | [86-283] IPR000814 | 5e-92 | TATA-box binding protein | |
| [104-201] IPR012294 | 4.7e-32 | Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal | ||
| [116-195] IPR012295 | 1.1e-29 | Beta2-adaptin/TATA-box binding, C-terminal | ||
| Orthology group | MCL18799 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213695-TA
ATGGATTCAGATCTTTCTGTTCCTGACTGCCCTATGGCGGAAATCGTGAGTGATGTTAATGTACAAAATATGCAAACTGATGGACACACTCCAGTTAATGAAAAACAAAACCCACAACGAGGGAATACGAAGCTTTTAACAAGTGGGACACCTAAGCCTCATTCCTTAGAAAATGTGCCATCAACTCCACAAATTTCAGGAGATATAACTTTGACACCAACACATCGAACATTCACTCCACAAACTCCATCTGTGAATCCACATAATTCTATGAGTGCCATTACCCCAATGGCAAGTGCAGTTAATCAAGCAAAAAATAGTATAAAATTTCAAAATTGTATTTCTACAGTAAGTTTAGATTGTGAACTGAATTTGTTAGACATATACTGTAGAACAAGGTTTTCAGAATACAACCCTGCTAGATTTAATGGAGTCGTTATGAAGATTTTGGAACCGCGAGCCACAGCCCTAGTATTTAGATCTGGTAAAATAGTCTGTACGGGAGCCAAAAATGGACATGACTCATATATCGCAGCTAGAAAATTTGCAAGAATTATTCAGAAACTTGGTTTTCCGGTGAAATTTGTTGATTTCAAAGTTCTTAATTTTCTAGCAACAGCGGATTTAAGATTTCCCATAAAACTGGAAGCGCTACAGCAAGCTCACGGTCAGTTCACTTCATATGAACCGGAACTTTTCTCTGGCCTCGTTTATAGAATGATACGACCAAGGGTTGTGTTGCTAATATTTGTTAATGGAAAAATGGTTATAACAGGCGCTAAAACTAATCAAGAAGTTTATGAAGCAGTTGACATAATACACCCCATTTTAAGAAGTTACAAGAAAAATTGA
>DPOGS213695-PA
MDSDLSVPDCPMAEIVSDVNVQNMQTDGHTPVNEKQNPQRGNTKLLTSGTPKPHSLENVPSTPQISGDITLTPTHRTFTPQTPSVNPHNSMSAITPMASAVNQAKNSIKFQNCISTVSLDCELNLLDIYCRTRFSEYNPARFNGVVMKILEPRATALVFRSGKIVCTGAKNGHDSYIAARKFARIIQKLGFPVKFVDFKVLNFLATADLRFPIKLEALQQAHGQFTSYEPELFSGLVYRMIRPRVVLLIFVNGKMVITGAKTNQEVYEAVDIIHPILRSYKKN-