DPOGS213695 | ||
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Transcript | DPOGS213695-TA | 852 bp |
Protein | DPOGS213695-PA | 283 aa |
Genomic position | DPSCF300219 + 375151-376537 | |
RNAseq coverage | 92x (Rank: top 62%) |
Annotation | ||||
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Heliconius | HMEL016431 | 1e-112 | 78.60% |   |
Bombyx | BGIBMGA010619-TA | 1e-64 | 61.71% |   |
Drosophila | Trf-PA | 5e-64 | 54.00% |   |
EBI UniRef50 | UniRef50_Q17JE5 | 4e-73 | 66.50% | TATA binding protein, putative n=1 Tax=Aedes aegypti RepID=Q17JE5_AEDAE |
NCBI RefSeq | XP_001654561.1 | 8e-74 | 66.50% | TATA binding protein, putative [Aedes aegypti] |
NCBI nr blastp | gi|157126257 | 2e-72 | 66.50% | TATA binding protein, putative [Aedes aegypti] |
NCBI nr blastx | gi|157126257 | 3e-69 | 66.50% | TATA binding protein, putative [Aedes aegypti] |
Group | ||||
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Gene Ontology | GO:0003677 | 5e-92 | DNA binding | |
GO:0006355 | 5e-92 | regulation of transcription, DNA-dependent | ||
GO:0006367 | 5e-92 | transcription initiation from RNA polymerase II promoter | ||
GO:0005488 | 1.1e-29 | binding | ||
KEGG pathway | aag:AaeL_AAEL002079 | 2e-73 |   | |
  | K03120 (TBP, tbp) | maps-> | Huntington's disease | |
  |   |   | Basal transcription factors | |
InterPro domain | [86-283] IPR000814 | 5e-92 | TATA-box binding protein | |
[104-201] IPR012294 | 4.7e-32 | Transcription factor TFIID, C-terminal/DNA glycosylase, N-terminal | ||
[116-195] IPR012295 | 1.1e-29 | Beta2-adaptin/TATA-box binding, C-terminal | ||
Orthology group | MCL18799 |   | Insect specific |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213695-TA
ATGGATTCAGATCTTTCTGTTCCTGACTGCCCTATGGCGGAAATCGTGAGTGATGTTAATGTACAAAATATGCAAACTGATGGACACACTCCAGTTAATGAAAAACAAAACCCACAACGAGGGAATACGAAGCTTTTAACAAGTGGGACACCTAAGCCTCATTCCTTAGAAAATGTGCCATCAACTCCACAAATTTCAGGAGATATAACTTTGACACCAACACATCGAACATTCACTCCACAAACTCCATCTGTGAATCCACATAATTCTATGAGTGCCATTACCCCAATGGCAAGTGCAGTTAATCAAGCAAAAAATAGTATAAAATTTCAAAATTGTATTTCTACAGTAAGTTTAGATTGTGAACTGAATTTGTTAGACATATACTGTAGAACAAGGTTTTCAGAATACAACCCTGCTAGATTTAATGGAGTCGTTATGAAGATTTTGGAACCGCGAGCCACAGCCCTAGTATTTAGATCTGGTAAAATAGTCTGTACGGGAGCCAAAAATGGACATGACTCATATATCGCAGCTAGAAAATTTGCAAGAATTATTCAGAAACTTGGTTTTCCGGTGAAATTTGTTGATTTCAAAGTTCTTAATTTTCTAGCAACAGCGGATTTAAGATTTCCCATAAAACTGGAAGCGCTACAGCAAGCTCACGGTCAGTTCACTTCATATGAACCGGAACTTTTCTCTGGCCTCGTTTATAGAATGATACGACCAAGGGTTGTGTTGCTAATATTTGTTAATGGAAAAATGGTTATAACAGGCGCTAAAACTAATCAAGAAGTTTATGAAGCAGTTGACATAATACACCCCATTTTAAGAAGTTACAAGAAAAATTGA
>DPOGS213695-PA
MDSDLSVPDCPMAEIVSDVNVQNMQTDGHTPVNEKQNPQRGNTKLLTSGTPKPHSLENVPSTPQISGDITLTPTHRTFTPQTPSVNPHNSMSAITPMASAVNQAKNSIKFQNCISTVSLDCELNLLDIYCRTRFSEYNPARFNGVVMKILEPRATALVFRSGKIVCTGAKNGHDSYIAARKFARIIQKLGFPVKFVDFKVLNFLATADLRFPIKLEALQQAHGQFTSYEPELFSGLVYRMIRPRVVLLIFVNGKMVITGAKTNQEVYEAVDIIHPILRSYKKN-