| DPOGS213698 | ||
|---|---|---|
| Transcript | DPOGS213698-TA | 645 bp |
| Protein | DPOGS213698-PA | 214 aa |
| Genomic position | DPSCF300219 + 406876-407797 | |
| RNAseq coverage | 1240x (Rank: top 10%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016423 | 1e-121 | 96.26% | |
| Bombyx | BGIBMGA010671-TA | 2e-119 | 93.46% | |
| Drosophila | CG10306-PA | 3e-67 | 58.22% | |
| EBI UniRef50 | UniRef50_F5A6C9 | 2e-74 | 61.79% | Eukaryotic translation initiation factor 3 subunit 12 n=12 Tax=Coelomata RepID=F5A6C9_PROCL |
| NCBI RefSeq | NP_001040534.1 | 2e-116 | 92.99% | eukaryotic translation initiation factor 3 subunit K [Bombyx mori] |
| NCBI nr blastp | gi|114053117 | 4e-115 | 92.99% | eukaryotic translation initiation factor 3 subunit K [Bombyx mori] |
| NCBI nr blastx | gi|114053117 | 2e-112 | 92.99% | eukaryotic translation initiation factor 3 subunit K [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006413 | 8.4e-112 | translational initiation | |
| GO:0005634 | 8.4e-112 | nucleus | ||
| GO:0003743 | 8.4e-112 | translation initiation factor activity | ||
| GO:0043022 | 3.9e-52 | ribosome binding | ||
| GO:0006446 | 3.9e-52 | regulation of translational initiation | ||
| GO:0005852 | 3.9e-52 | eukaryotic translation initiation factor 3 complex | ||
| GO:0005488 | 1.1e-48 | binding | ||
| KEGG pathway | ||||
| InterPro domain | [1-213] IPR009374 | 8.4e-112 | Translation initiation factor 3, subunit 12, eukaryotic | |
| [1-118] IPR016020 | 3.9e-52 | Translation initiation factor 3, subunit 12, N-terminal, eukaryotic | ||
| [1-129] IPR016024 | 1.1e-48 | Armadillo-type fold | ||
| [122-213] IPR011991 | 1.4e-37 | Winged helix-turn-helix transcription repressor DNA-binding | ||
| [60-196] IPR019280 | 3.3e-34 | COP9 signalosome, subunit CSN8 | ||
| Orthology group | MCL13267 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213698-TA
ATGGCAGAAACCATGAGACAAACTGTGGCTTCAATTTTGAAAAGTATCGAGAGATATAACCCAGCCAATCTTCAGACACTCGAACGATACGTTGAGTTACAATCAAGGGAGAATACATACGATTTAGAAGCAAATTTAGCGGTTCTGAAACTTTATCAGTTCAATCCAGAAAGGTTCAACCCTGACATAACGTGCCAGATACTTTTAAAGGCACTTACAAATTTCCCTCACACCGACTTTACATTGTGCAAGTGTCTGCTTTTAGAATCTGTAGTGGAAAACGAGACCATTTCCCAAATAAAGTATCTGGCTGATATTCTTGAGCAATGCGATTTTGCCCAGTTCTGGAACAGAGTACACCAAATGCCGGAACTGTGTAACCGTATCAGCAGCTTCCATGATTCCATTCGCAAGTTTGTTTGTCATGTTGTCGGCATTACTTTCCAGACTATTGACAAGAATAACCTTGCTAACTTGTTAGGTGGAATCGATGATGTGACCCTGAAGCACTGGGTTAAAAAATATGGTTGGAAGGATGAGGGTAACCTTATCTTCATCGCAAATCAAGATGAGAACATCAAGACTAAGAATATTACAGAGAAAATTGAATTTGATCATCTCGCTCCCTTAATGGCAATTTTGTAA
>DPOGS213698-PA
MAETMRQTVASILKSIERYNPANLQTLERYVELQSRENTYDLEANLAVLKLYQFNPERFNPDITCQILLKALTNFPHTDFTLCKCLLLESVVENETISQIKYLADILEQCDFAQFWNRVHQMPELCNRISSFHDSIRKFVCHVVGITFQTIDKNNLANLLGGIDDVTLKHWVKKYGWKDEGNLIFIANQDENIKTKNITEKIEFDHLAPLMAIL-