Monarch geneset OGS2.0

DPOGS213701
TranscriptDPOGS213701-TA1323 bp
ProteinDPOGS213701-PA440 aa
Genomic positionDPSCF300219 + 463190-465952
RNAseq coverage3768x (Rank: top 3%)
Annotation
HeliconiusHMEL0164180.097.03% 
BombyxBGIBMGA010673-TA0.096.77% 
Drosophilame31B-PA0.085.55% 
EBI UniRef50UniRef50_Q95YF30.076.21%ATP-dependent RNA helicase cgh-1 n=342 Tax=root RepID=CGH1_CAEEL
NCBI RefSeqXP_001602897.10.087.19%PREDICTED: similar to DEAD box ATP-dependent RNA helicase [Nasonia vitripennis]
NCBI nr blastpgi|3838583470.086.85%PREDICTED: putative ATP-dependent RNA helicase me31b-like [Megachile rotundata]
NCBI nr blastxgi|3838583470.086.14%PREDICTED: putative ATP-dependent RNA helicase me31b-like [Megachile rotundata]
Group
Gene OntologyGO:00055241.7e-48ATP binding
GO:00080261.7e-48ATP-dependent helicase activity
GO:00036761.7e-48nucleic acid binding
GO:00043864.2e-27helicase activity
KEGG pathwaynvi:1001190500.0 
 K12614 (DDX6, RCK, DHH1)maps-> RNA degradation
InterPro domain[75-271] IPR0140013.8e-56DEAD-like helicase
[81-245] IPR0115451.7e-48DNA/RNA helicase, DEAD/DEAH box type, N-terminal
[307-388] IPR0016504.2e-27Helicase, C-terminal
Orthology groupMCL15161 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213701-TA
ATGATGACTGAAAATAGAATTAGTTCAAGTAATCACGTCGGAAACATGAGCAGTCAGAAAGGAGAAGTCGATAAAACTGTAGAAGATATTGGGTGGAAAGCAAAATTAAAACTACCCCCCAAAGACAGAAGACTTAAAACCAGTGATGTAACTGACACAAGAGGAAATGAGTTTGAAGAGTTTTGTCTTAAAAGAGAAATTTTGATGGGAATTTTTGAAAAGGGATGGGAGAAGCCATCTCCTATTCAAGAGGCTTCAATTCCCATTGCACTTAGTGGTAAAGATGTTCTGGCCAGAGCAAAGAATGGTACTGGCAAGACAGGCGCTTATTGTATTCCAGTTTTAGAACAGGTTGATCCAAAAAAAGATGCTATACAAGCACTTATAGTGGTGCCGACCAGAGAGTTAGCACTGCAGACATCACAAATTTGCATTGAACTGGCAAAACACACAGACATTCGTGTAATGGTCACCACGGGAGGAACTAACTTAAGAGATGATATAATGCGCATTTATCAAAATGTCCAAGTAATAATAGCCACACCAGGGCGTATGATTGATCTCATGGATAAACAAGTAGCCAAGATGGACCAGTGCAGGATGCTTGTGTTAGATGAAGCGGACAAACTCCTCTCTCAGGACTTCAAAGGCATGTTGGATACTGTTATCTCACGGCTACCAAAAGAACGTCAAATTTTGCTATTCTCAGCAACCTTTCCACTAAATGTAAAAAAGTTTATGGAGAAACATTTAAGAGAACCATATGAGATTAATCTCATGGAAGAATTAACATTGAAAGGAGTCACACAATACTATGCATTTGTACAAGAAAGACAGAAAGTGCATTGCTTAAATACACTCTTTTCAAAGTTACAAATTAACCAGTCTATTATATTCTGTAATTCGACCCAGCGCGTAGAGTTGCTCGCTAAGAAGATAACGGAGTTGGGTTACTGTTGCTACTACATACACGCACGTATGGCTCAGGCGCACCGCAACCGCGTGTTCCACGACTTCAGGGCGGGGTTGTGTCGCAACTTGGTGTGTTCGGATCTGTTCACTCGCGGTATAGACGTCCAGGCTGTGAACGTGGTTATAAACTTCGACTTCCCGCGCATGGCGGAGACCTACTTGCATCGCATCGGTCGCTCCGGCCGCTTCGGCCATCTCGGTATCGCAATCAACCTCATCACTTATGAGGATCGCTTTGCGCTTCACCGCATCGAGCAGGAACTGGGCACTGAGATCAAACCTATACCCAAGGTGATCGATCCCGCCCTGTACGTGTCCCGCCCCGACGAAGACGACTCGGCAGATAAGTAA

Protein sequence:

>DPOGS213701-PA
MMTENRISSSNHVGNMSSQKGEVDKTVEDIGWKAKLKLPPKDRRLKTSDVTDTRGNEFEEFCLKREILMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVDPKKDAIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDTVISRLPKERQILLFSATFPLNVKKFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSIIFCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGIDVQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKPIPKVIDPALYVSRPDEDDSADK-