| DPOGS213711 | ||
|---|---|---|
| Transcript | DPOGS213711-TA | 735 bp |
| Protein | DPOGS213711-PA | 244 aa |
| Genomic position | DPSCF300666 + 3656-8583 | |
| RNAseq coverage | 97x (Rank: top 62%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL007890 | 5e-94 | 79.27% | |
| Bombyx | BGIBMGA008433-TA | 4e-102 | 87.05% | |
| Drosophila | Gmd-PA | 8e-80 | 67.36% | |
| EBI UniRef50 | UniRef50_F1KSH1 | 5e-77 | 67.36% | GDP-mannose 4,6 dehydratase 1 n=3 Tax=Opisthokonta RepID=F1KSH1_ASCSU |
| NCBI RefSeq | XP_001863206.1 | 4e-86 | 73.58% | GDP-mannose 4,6 dehydratase [Culex quinquefasciatus] |
| NCBI nr blastp | gi|383853090 | 1e-85 | 75.13% | PREDICTED: GDP-mannose 4,6 dehydratase-like [Megachile rotundata] |
| NCBI nr blastx | gi|383853090 | 7e-83 | 75.13% | PREDICTED: GDP-mannose 4,6 dehydratase-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0019673 | 1.5e-114 | GDP-mannose metabolic process | |
| GO:0005622 | 1.5e-114 | intracellular | ||
| GO:0008446 | 1.5e-114 | GDP-mannose 4,6-dehydratase activity | ||
| GO:0044237 | 2.4e-24 | cellular metabolic process | ||
| GO:0003824 | 2.4e-24 | catalytic activity | ||
| GO:0050662 | 2.4e-24 | coenzyme binding | ||
| GO:0005488 | 1.7e-10 | binding | ||
| KEGG pathway | cqu:CpipJ_CPIJ012919 | 1e-85 | ||
| K01711 (E4.2.1.47, gmd) | maps-> | Amino sugar and nucleotide sugar metabolism | ||
| Fructose and mannose metabolism | ||||
| InterPro domain | [1-243] IPR006368 | 1.5e-114 | GDP-mannose 4,6-dehydratase | |
| [52-146] IPR001509 | 2.4e-24 | NAD-dependent epimerase/dehydratase | ||
| [13-51] IPR016040 | 1.7e-10 | NAD(P)-binding domain | ||
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213711-TA
ATGGCAGAGCCTGGCACTAGTGGAAATGTTAATAGAAAAGTCGCATTAATCACCGGTATAACCGGACAGGATGGATCTTATTTAACTGAATTCTTAATTGAAAAAGGCTATGAGGTCCATGGAATTCTTCGGCGGTCATCCTCATTTAATACCGCGTGTGCTAAGCTCTACGGTCACTGGATAGTAGTGAACTATAGGGAGGCGTATGGGATGTTCGCGTGTAACGGCTTACTCTTCAACCATGAGAGCCCGAGGCGGGGGGAGAACTTCGTAACGAGAAAAATAACCCGCGGAGTGGCCAAGATACAGCTGGGATTGATGTCGCATCTGGAAATGGGCAATTTGGATAGCAAAAGAGATTGGGGACATGCCAAGGATTATGTAGAGGCTATGTGGCTGATACTGCAGCAGGATGAGCCGGAAGATTTCGTGGTTGCCTCCGGCGAGGCTCACAGTGTGAGGGAATTCATAGAGAAGGCTTTCGCGTGTGTGGGGAGAGGGGTGGTGTGGAGGGGGGAGGGGGTGCACGAAACTGGTCACGATAAACATACGGACCAACTACTCGTTAAGGTCAACCCAAAATATTTCAGACCCACGGAAGTGGATCTTCTTCTAGGTGACGCGTCAAAAGCCAAACAGAAATTAGGTTGGACCAACAAAACCACCTTCGAAGAGCTGGTCAAAGATATGGTGGAGGCAGACCTTGAACTCATGAAGAAAAACCCCGAGGCATAA
>DPOGS213711-PA
MAEPGTSGNVNRKVALITGITGQDGSYLTEFLIEKGYEVHGILRRSSSFNTACAKLYGHWIVVNYREAYGMFACNGLLFNHESPRRGENFVTRKITRGVAKIQLGLMSHLEMGNLDSKRDWGHAKDYVEAMWLILQQDEPEDFVVASGEAHSVREFIEKAFACVGRGVVWRGEGVHETGHDKHTDQLLVKVNPKYFRPTEVDLLLGDASKAKQKLGWTNKTTFEELVKDMVEADLELMKKNPEA-