Monarch geneset OGS2.0

DPOGS213732
TranscriptDPOGS213732-TA2796 bp
ProteinDPOGS213732-PA931 aa
Genomic positionDPSCF300278 + 67316-75191
RNAseq coverage10x (Rank: top 84%)
Annotation
HeliconiusHMEL0171700.073.74% 
BombyxBGIBMGA011486-TA0.071.32% 
DrosophilaCG5621-PB0.041.66% 
EBI UniRef50UniRef50_F5HKL20.044.10%AGAP002797-PB n=3 Tax=Neoptera RepID=F5HKL2_ANOGA
NCBI RefSeqXP_001655460.10.046.07%ionotropic glutamate receptor subunit ia [Aedes aegypti]
NCBI nr blastpgi|1571296950.046.07%ionotropic glutamate receptor subunit ia [Aedes aegypti]
NCBI nr blastxgi|1571296950.046.07%ionotropic glutamate receptor subunit ia [Aedes aegypti]
Group
Gene OntologyGO:00160204.8e-85membrane
GO:00049704.8e-85ionotropic glutamate receptor activity
GO:00052344.8e-85extracellular-glutamate-gated ion channel activity
GO:00068101.2e-24transport
GO:00302881.2e-24outer membrane-bounded periplasmic space
GO:00052151.2e-24transporter activity
GO:00048726.9e-12receptor activity
GO:00068116.9e-12ion transport
GO:00052166.9e-12ion channel activity
KEGG pathway 
InterPro domain[411-780] IPR0013204.8e-85Ionotropic glutamate receptor
[62-360] IPR0018281.1e-28Extracellular ligand-binding receptor
[417-778] IPR0016381.2e-24Extracellular solute-binding protein, family 3
[421-486] IPR0195945.1e-23Glutamate receptor, L-glutamate/glycine-binding
[542-567] IPR0015086.9e-12NMDA receptor
Orthology groupMCL10026 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS213732-TA
ATGATTGTGAAATTGAAATTTATATTCGTTGTACTGGAATGTTTGATTTATGTTAACGGAGAGAGAATTATAGGGGCCATTTGTGATGACGGGAATTTTTTAAACCATGCAACATTCGATGTCGCTGTTGAAGCGGCATCGAGAAATGAAAAGAATGCATTCGTTTCTTCCGTAGTGAAAACTTCACCTGGTGATATAAATGAAGCTGAACTAGCTATGTGCTCGCTCTTGGAGCAAAATATTCTGGGTGTTTTTGGACCACAGACACGAAATACTTTAGAGCATGTGCAATCGCTGGCCGATTATTTTGAAATTCCACAAATAATTACTGAGCCGATAGAAATTCTAAACAGAAATTGGTCCGCTGTGAGCTTGTACCCTCATCATAACACTTATTCCCAGGTTTTTGCTGACATCATCACGATGAAGGGTTGGACGGAGTTTACAATCATTTACGAAGGCGCTGAACTTTTATCTTTTTTGAATAACATTGTTTCTATAGAAGATTTAGGATCAGGTGAAGAAGTTAGCATAAAATTTATACAACTTCCAGGCGACGCTGATTATAGATCTCAGCTTAAAAACATTAAAGTATCTGGATCATTAAACTACGTGGTTATCTGTCAACTAAAGAATCTATTAAATCTTTTAGAGCAAGCGCAACAAGTTGGCATAATGTCCGACGAACATAGCTATCTCATAATGAATCCAGACTTTCAAACTATCAACATCAGCCCATTTAAGCATGGCGGTTCAAATGTAACAGGTATTAGGTTTTTCGATCCCGAACTAAAGGAAATTCAGGAGTTAATAATTTCAATAAACGGTAAGGTGAAGGAACTATCGGATAATCAATTGACAGATGCAATAAAAGAAAATGGGCTTACATTAAATTTAGCCCTCATGTACGATTCGGTGATGCTCTACACGTCAGCTATCAAAGCAATGAGCTTAGAGTACGGCGGCAATGTTACCTGTGATTCCGATGAAACGTGGAATTTGGGTTCCACTGTCATTAATTACGTGAGAACAAATGAAATCGACGGTTTGACGGGGCTCATAAAATTCAATGAAGAAGGCTTCCGCACCGATATAGAAGTGGAAGTCTTTGAAGTTATGGCTCATGGCCTTGAAAAGGTAGGGACTTGGAATTCAGAAGACGGATACACGTTGTCAAGAAAAGTCATACCAGTCGCGGAAGAGGAAGGAACTGATTCAATGAAAGGAAAGCATTTTATTGTTATCACCGCTTTGAGTGCTCCTTATGGGATGCTAAAGGAGTCATCTAAAAAGCTGGAGGGAAATGACCGTTATGAAGGTTTTGGAATAGAAATCATCGAAGAACTAGCGAAAATGAATGAATTCAACTATACATTTGATATCCAAACCGACGGGGTGTATGGATCGTATGATGCTAAAATAGGCAAATGGACTGGAATGATGGAAAAGATAATGGATGGCAGAGCTGATTTTGCCATCACCGATTTAACGATAACAGCTGCGAGACAAAAGGTGGTGGATTTTACAAGTCCATTCATGAATTTGGGCATTACCATATTATTCAAAAAGCCTTCAAAGCAACCGCCTGATTTGTTTTCATTTATTTCACCATTTTCATATGCTGTATGGGGATATTTGACTGGCGCGTACGTAGGTGTTTCGGCCCTGCTTTTCCTACTAGGTAGATTTGCTCCAGAAGAATGGCAAAACCCGTACCCTTGTATAGAAGAGCCGGAGACTTTGGACAATCAGTGGACATTAGCTAACTCGTTCTGGTTCACGTTGGGTAGTGTACTTACCCAGGGATCTGAAATAGCACCCATAGCTTTATCGACGAGAATGGCTGGGAGCTTGTGGTGGTTCTTCACGCTGATCATGGTATCATCTTATACAGCCAACTTGGCTGCGTTCCTGACGGTTGAATCGAAATTTTACGCCATTAAAAGTGTAGCCGATTTGTCCAACAACCCCTACGACATTAAGTACGGTGCGAAAAAAGGAGGAGCTACATACGGTTTTTTTAAGGAATCCGACAACATACTGTATCATAAGATGTATCAATACATGGATGAACATCCAGATCTGATGACCCAGACTAACGAAATTGGACTCGAAAGGGTGAAAAATGAGAATTACGCCTTTTTGATGGAGTCGACGTCTATAGAGTACATGGTCGAGAGGAATTGCGATGTCGCTCGAGTAGGCGGCATGTTAGACAGCAAAGGATACGGAATAGCTATGAAGAAAAATTCTCCGTACAGACAGCCAATGAGCGAATCGATATTGCAATTACAGGAACAAGGTAAAATAACTAGAATGAAAGACAAATGGTGGAAGGAAAAGAGAGGCGGCGGAGCTTGTGCGGATGACGATGCAAGCAGTGGCGACGCGCAACCTTTGGTTCTGGCGAACGTGGGCGGAGTGTTCATAGTCCTCGCTGTGGGATCCGGCTTAGCGATCGTCTGCGCTTTCTTTGAAATGATTGTAAATGTGTGGTTTATATCAAGAAAGGCGAAGGTGCCATTCTTAGAAGAGTTGAAGGCCGAATTGATGTTCGTGTTCAGCTTTAGCGGAGACGTCAAGCCGGTGCGACACCGTGAATCTTCTGATACGTCAACAGATTCAAAAAAAGAAAATAAAGAAGACGACGAAGAATCTCAAGAAGAAGAAAACGATGTGACCAACCGAATACCGACGCCTTCTCAAAGATCAAGTCATTCGCGACACGTGTCGCACAGCAGACGTCAGAGCAACGCCTCGTATATGGCCAAAGTACGAAAATCTAGCAAGCCATAA

Protein sequence:

>DPOGS213732-PA
MIVKLKFIFVVLECLIYVNGERIIGAICDDGNFLNHATFDVAVEAASRNEKNAFVSSVVKTSPGDINEAELAMCSLLEQNILGVFGPQTRNTLEHVQSLADYFEIPQIITEPIEILNRNWSAVSLYPHHNTYSQVFADIITMKGWTEFTIIYEGAELLSFLNNIVSIEDLGSGEEVSIKFIQLPGDADYRSQLKNIKVSGSLNYVVICQLKNLLNLLEQAQQVGIMSDEHSYLIMNPDFQTINISPFKHGGSNVTGIRFFDPELKEIQELIISINGKVKELSDNQLTDAIKENGLTLNLALMYDSVMLYTSAIKAMSLEYGGNVTCDSDETWNLGSTVINYVRTNEIDGLTGLIKFNEEGFRTDIEVEVFEVMAHGLEKVGTWNSEDGYTLSRKVIPVAEEEGTDSMKGKHFIVITALSAPYGMLKESSKKLEGNDRYEGFGIEIIEELAKMNEFNYTFDIQTDGVYGSYDAKIGKWTGMMEKIMDGRADFAITDLTITAARQKVVDFTSPFMNLGITILFKKPSKQPPDLFSFISPFSYAVWGYLTGAYVGVSALLFLLGRFAPEEWQNPYPCIEEPETLDNQWTLANSFWFTLGSVLTQGSEIAPIALSTRMAGSLWWFFTLIMVSSYTANLAAFLTVESKFYAIKSVADLSNNPYDIKYGAKKGGATYGFFKESDNILYHKMYQYMDEHPDLMTQTNEIGLERVKNENYAFLMESTSIEYMVERNCDVARVGGMLDSKGYGIAMKKNSPYRQPMSESILQLQEQGKITRMKDKWWKEKRGGGACADDDASSGDAQPLVLANVGGVFIVLAVGSGLAIVCAFFEMIVNVWFISRKAKVPFLEELKAELMFVFSFSGDVKPVRHRESSDTSTDSKKENKEDDEESQEEENDVTNRIPTPSQRSSHSRHVSHSRRQSNASYMAKVRKSSKP-