| DPOGS213877 | ||
|---|---|---|
| Transcript | DPOGS213877-TA | 612 bp |
| Protein | DPOGS213877-PA | 203 aa |
| Genomic position | DPSCF300141 + 21091-22662 | |
| RNAseq coverage | 827x (Rank: top 16%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008156 | 2e-75 | 81.42% | |
| Bombyx | BGIBMGA013476-TA | 3e-17 | 81.48% | |
| Drosophila | Dad-PC | 7e-31 | 39.77% | |
| EBI UniRef50 | UniRef50_UPI00021A6B9D | 5e-41 | 50.00% | UPI00021A6B9D related cluster n=3 Tax=unknown RepID=UPI00021A6B9D |
| NCBI RefSeq | XP_002428962.1 | 2e-45 | 53.93% | smad6, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|242016959 | 4e-44 | 53.93% | smad6, putative [Pediculus humanus corporis] |
| NCBI nr blastx | gi|242016959 | 1e-44 | 53.93% | smad6, putative [Pediculus humanus corporis] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 4.2e-54 | regulation of transcription, DNA-dependent | |
| GO:0005622 | 4.2e-54 | intracellular | ||
| GO:0005515 | 1.4e-44 | protein binding | ||
| KEGG pathway | phu:Phum_PHUM411970 | 7e-45 | ||
| K04677 (SMAD6_7) | maps-> | Endocytosis | ||
| TGF-beta signaling pathway | ||||
| InterPro domain | [35-199] IPR013790 | 4.2e-54 | Dwarfin | |
| [9-199] IPR008984 | 1.4e-44 | SMAD/FHA domain | ||
| [36-200] IPR001132 | 7.9e-44 | SMAD domain, Dwarfin-type | ||
| [33-200] IPR017855 | 1.3e-37 | SMAD domain-like | ||
| Orthology group | MCL15525 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213877-TA
ATGACCTACAAACTCATCATTAAGTGTCTCATGATATTTCCTGGCGGTACCTCACACAAAGCACCTCGACTCGCCAGTGGAGGGTTCAAGCGTCAGAGCTGGGAGAGCGAGTGGTGCCGGCTGGCGTACTGGGAGCTGACCCAGCGTGTCGGGAGGCAGCTGGGGGTGAGAGTGCGCGCGGTGGACGTGTTCGCCGGCGCCGGGGGTAGCTGCGGCCAGGGGAGACACGGCCTTTGTGTGGACGACCTCGGAGACAGGGGCACGCAGGTGCGGAAGACCCGGGCGAAGATAGGTCTCGGCGTGACGCTATCCTTGGAGGCGGACGGCGTCTGGTTGTACAACCGCAGTCAAGAGCCAGTGTTCGTGTCGTCGCCGGCGCTGGACGCGGCCGCTGCCAAAGCCCTCCTGGTGTGGCGCGTCGCCCCGGGTCATTGTCTGTGCGTTTTCGACCCCGGGGCTCCACCGCCCGCCCTGTCTCTGCCGCACGTCGGCCCCGTCGACAACACCTCCGTCAGGATCTCCTTCGCCAAGGGCTGGGGTCCCAAATATTCCAGGCGTGACGTCACCGCCTGTCCCTGCTGGTTGGAAGTGCTGCTAGCGCCCGCCAGCTGA
>DPOGS213877-PA
MTYKLIIKCLMIFPGGTSHKAPRLASGGFKRQSWESEWCRLAYWELTQRVGRQLGVRVRAVDVFAGAGGSCGQGRHGLCVDDLGDRGTQVRKTRAKIGLGVTLSLEADGVWLYNRSQEPVFVSSPALDAAAAKALLVWRVAPGHCLCVFDPGAPPPALSLPHVGPVDNTSVRISFAKGWGPKYSRRDVTACPCWLEVLLAPAS-