DPOGS213930 | ||
---|---|---|
Transcript | DPOGS213930-TA | 864 bp |
Protein | DPOGS213930-PA | 287 aa |
Genomic position | DPSCF300240 + 6038-105884 | |
RNAseq coverage | 11x (Rank: top 84%) |
Annotation | ||||
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Heliconius | HMEL009762 | 2e-109 | 70.30% |   |
Bombyx | BGIBMGA009080-TA | 5e-56 | 92.23% |   |
Drosophila | Shaw-PC | 1e-108 | 69.58% |   |
EBI UniRef50 | UniRef50_P17972 | 1e-105 | 69.58% | Potassium voltage-gated channel protein Shaw n=27 Tax=Neoptera RepID=KCNAW_DROME |
NCBI RefSeq | XP_001951310.1 | 2e-116 | 76.78% | PREDICTED: similar to AGAP008200-PA [Acyrthosiphon pisum] |
NCBI nr blastp | gi|328707216 | 8e-116 | 76.78% | PREDICTED: potassium voltage-gated channel protein Shaw-like [Acyrthosiphon pisum] |
NCBI nr blastx | gi|328707216 | 1e-113 | 76.78% | PREDICTED: potassium voltage-gated channel protein Shaw-like [Acyrthosiphon pisum] |
Group | ||||
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Gene Ontology | GO:0006813 | 6.5e-31 | potassium ion transport | |
GO:0005249 | 6.5e-31 | voltage-gated potassium channel activity | ||
GO:0008076 | 6.5e-31 | voltage-gated potassium channel complex | ||
GO:0016020 | 2.8e-30 | membrane | ||
GO:0005515 | 1.3e-12 | protein binding | ||
KEGG pathway |   | |||
InterPro domain | [1-255] IPR015572 | 2e-141 | Voltage-dependent potassium channel Kv3, invertebrate | |
[4-112] IPR011333 | 2.1e-42 | BTB/POZ fold | ||
[48-61] IPR003974 | 6.5e-31 | Potassium channel, voltage dependent, Kv3 | ||
[7-97] IPR003131 | 2.8e-30 | Potassium channel, voltage dependent, Kv, tetramerisation | ||
[47-66] IPR003091 | 4.6e-28 | Voltage-dependent potassium channel | ||
[5-105] IPR000210 | 1.3e-12 | BTB/POZ-like | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS213930-TA
ATGGATGGCGAAAATCGTATAATTTTGAACGTTGGCGGAATTAGATACGAAACTTACAAGGCCACCTTGAAGAAGATTCCCGCGACGCGCCTCTCCCGGCTCACGGAGGCTCTAGCTAACTACGACCCCGTTCTCAATGAATACTTCTTCGACAGACACCCTGGCGTGTTCGCACAAGTCCTGAATTATTACAGAACTGGAAAGCTCCACTATCCCACAAATGTCTGCGGTCCTTTGTTCGAGGAGGAATTGGAGTTTTGGGGACTGGACTCCAACCAGGTGGAACCCTGCTGCTGGTCTACATACAGCATCCACAGAGACACACAAAATACCTTGGCTATTCTGGACAAATTGGACATCGACAGTGAGAAACCTTCGGAGGAGGAAATCGCCAGGCTTTTCGGATACGGGGAAGCTTACTTGGCTGGTGACGTGGGGACTTGGCAAAGAGTCAAGCCAAGGGTGTGGGCCCTTTTCGATGAGCCGTCAAGCTCCCCATCAGCAAAGGTGATATCGGCAATATCCGTTTTCTTCATCTGTGTGTCAGTTCTGAGTTTTTGTCTGAAGACACATCCTGACCTTCGTGTGCTGGAGCCATTATCTTTAGAAGATATTGAGAACACTACGGTCGTGGTTGCTAGACCGTGGCAGGATAATGGGCAGCCCCACGTGGCTTTCTTTTACATCGAGTTGGTCTGCAACGTATGGTTCACCATAGAACTGTTGGTTCGATCTGTGGTAAGTGGTAACTTTAAGTTTTTTTTTGTAGCCCATACTGTGCCGTACAAAAGATACTGTACAAAGCAATATTGTCTCATGTTTGCAATGTTATCGCTCGCTAAAGTTAGTGGTCACAAAGGATAA
>DPOGS213930-PA
MDGENRIILNVGGIRYETYKATLKKIPATRLSRLTEALANYDPVLNEYFFDRHPGVFAQVLNYYRTGKLHYPTNVCGPLFEEELEFWGLDSNQVEPCCWSTYSIHRDTQNTLAILDKLDIDSEKPSEEEIARLFGYGEAYLAGDVGTWQRVKPRVWALFDEPSSSPSAKVISAISVFFICVSVLSFCLKTHPDLRVLEPLSLEDIENTTVVVARPWQDNGQPHVAFFYIELVCNVWFTIELLVRSVVSGNFKFFFVAHTVPYKRYCTKQYCLMFAMLSLAKVSGHKG-