| DPOGS213958 | ||
|---|---|---|
| Transcript | DPOGS213958-TA | 498 bp |
| Protein | DPOGS213958-PA | 165 aa |
| Genomic position | DPSCF300226 + 128073-128697 | |
| RNAseq coverage | 221x (Rank: top 45%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL015290 | 9e-72 | 78.57% | |
| Bombyx | BGIBMGA003375-TA | 9e-75 | 81.17% | |
| Drosophila | rnh1-PA | 7e-53 | 59.87% | |
| EBI UniRef50 | UniRef50_E3X8H8 | 2e-54 | 62.42% | Putative uncharacterized protein n=2 Tax=Endopterygota RepID=E3X8H8_ANODA |
| NCBI RefSeq | NP_477315.1 | 2e-51 | 59.87% | ribonuclease H1, isoform A [Drosophila melanogaster] |
| NCBI nr blastp | gi|312374134 | 8e-54 | 62.42% | hypothetical protein AND_16414 [Anopheles darlingi] |
| NCBI nr blastx | gi|2677845 | 3e-51 | 59.87% | ribonuclease H1 [Drosophila melanogaster] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003676 | 9.4e-43 | nucleic acid binding | |
| GO:0004523 | 2.6e-30 | ribonuclease H activity | ||
| KEGG pathway | dme:Dmel_CG8729 | 4e-51 | ||
| K03469 (E3.1.26.4A, RNASEH1, rnhA) | maps-> | DNA replication | ||
| InterPro domain | [16-162] IPR012337 | 9.4e-43 | Ribonuclease H-like | |
| [19-160] IPR002156 | 2.6e-30 | Ribonuclease H domain | ||
| Orthology group | MCL13400 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS213958-TA
ATGCAAGGTTCGGGTGATAATTCTGAAGATTTTAAATTGGATGAAGATGGTTATGTTCAAGTGTTCACTGATGGAGCATGTTCATCAAACGGGAAGAACGGTGCCCGAGCTGGTCTCGGAGTGTTCTGGGGTGAGGGGCACCCTTTAAATATTAGTAAACCAGTCTCTGGACGAGCCACAAATAATTGCGGAGAAATCCAGGCAGCTACAGAGGCCATAAGAACTGCAGTAGACAATGGAATTACCAAACTGGCCATAAATACTGACTCCAAATTTCTTATAAATTCAGTTACAAAGTGGATTTCAGGTTGGAAGAGAAAAGGGTGGAAACTAGCATCAGGGGAGCCGGTCAAAAATGAAAAAGACTTCAAAGAGTTAGATAGTATTCAGAACAAAATTGACATTAAATGGATCTATGTTGAAGCACATCGAGGCATACACGGAAACGAAATGGCTGATCAGCTGGCCAAGGCTGGAGCTGCTATGTATAATAAATAA
>DPOGS213958-PA
MQGSGDNSEDFKLDEDGYVQVFTDGACSSNGKNGARAGLGVFWGEGHPLNISKPVSGRATNNCGEIQAATEAIRTAVDNGITKLAINTDSKFLINSVTKWISGWKRKGWKLASGEPVKNEKDFKELDSIQNKIDIKWIYVEAHRGIHGNEMADQLAKAGAAMYNK-