Monarch geneset OGS2.0

DPOGS214066
TranscriptDPOGS214066-TA3513 bp
ProteinDPOGS214066-PA1170 aa
Genomic positionDPSCF300171 + 45959-49471
RNAseq coverage163x (Rank: top 52%)
Annotation
HeliconiusHMEL0082700.091.97% 
BombyxBGIBMGA010560-TA0.086.80% 
DrosophilardgB-PH0.059.68% 
EBI UniRef50UniRef50_P431250.060.47%Protein retinal degeneration B n=36 Tax=root RepID=RDGB_DROME
NCBI RefSeqXP_393355.20.063.94%PREDICTED: similar to retinal degeneration B CG11111-PA, isoform A isoform 1 [Apis mellifera]
NCBI nr blastpgi|3407116570.065.59%PREDICTED: protein retinal degeneration B-like [Bombus terrestris]
NCBI nr blastxgi|3407116570.064.97%PREDICTED: protein retinal degeneration B-like [Bombus terrestris]
Group
Gene OntologyGO:00068100transport
GO:00056220intracellular
GO:00468724.4e-25metal ion binding
KEGG pathwaygga:7715492e-50 
 K01106 (E3.1.3.56)maps-> Phosphatidylinositol signaling system
    Inositol phosphate metabolism
InterPro domain[2-1155] IPR0016660Phosphatidylinositol transfer protein
[1-272] IPR0233939e-123START-like domain
[989-1120] IPR0132096.7e-51LNS2, Lipin/Ned1/Smp2
[657-755] IPR0041774.4e-25DDHD
[980-1070] IPR0232142.5e-10HAD-like domain
Orthology groupMCL10702 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214066-TA
ATGTTAATCAAAGAATATAGAATACCATTGCCACTCACTGTAGAAGAGTATCGCATAGCCCAATTGTATATGATAGCGAAGAAAAGCCGAGAAGAAAGTTCCGGTGAGGGTAGTGGAGTTGAGATTATTGTTAATGAGCCATATGACAATGGCCCTGGTGGAAACGGGCAGTATACACAGAAAATATATCATGTTGGAAGCCACTTGCCAGGTTGGTTCAAAAGCCTACTTCCTAAATCAGCCTTAACAGTGTCTGAAGAAGCATGGAACGCTTATCCCTATACTAAAACAAGATACACCTGTCCATTTGTTGAAAAATTTTCACTTGAAATTGAAACCTATTATTTTGCTGACAATGGTCATCAGGAAAATGTCTTTAAATTATCAGGAAGTGACTTAAAAAATAGAGCTGTTGATATTATCGATGTAGTTAAGGATCAGCTTTATGGTGCGGATTACGTGAAAGAAGAAGATCCAAAGATATTTGTTTCTCAAAAATGTAACAGAGGGCCATTATCGGAGTCATGGCTCGAAGATTACTGGCGTGAAGTTCAAGGCAAAACACAGCCATTACCGAATGGAAAATCACTCATGTGTGCGTATAAGTTGTGTAGGGTGGAATTCCGTTATTGGGGAATGCAAACTAAATTGGAAAAATTTATTCACGATGTGGCGCTTAGAAAAACGATGCTTCGAGCTCATCGTCAAGCATGGGCCTGGCAAGACGAATGGCACGGCTTGACTATGGACGATATAAGAGAAATTGAGAGGCAAACACAGCTGGCTTTGCAAAAGAAAATGGCGGGAGATGTTGGTGAAGACACTGATTTATCTGAAGAGAATTCAAAGTCTTTAGCTGCTACTATGAGCAGTCTTGAAAAGAATGAGGATACTGCGAGTCCAGTATCAGTCAAGAAAGGTATGGAAAAGAGAGTACAAAAGCAATTAAGTCCTGAAAGTACTCCTCCATCAGAGCCCAAATCGTGTTCAAAGTCTAACCTTAGATCATCTTCTTCGGGGTCCTTAAAAAGTTTGCAAGTCCAAGTGGCCAGTTGGAGAATGGAAACTCTTGTTAGGGAATCAGAAACAGAAACTGGTTCTGAAGATGAGTTTTATGATTGCGAATCATCATTTAACAAATGGTCTTCGATGTGTTCTTTAGATGAAGGTGATATAGATATCTCACCAACACAAGGTGATCTGAATCAAGAAGACAGTATATTTAATCCCACGTTCTTAAAACGAGTTACCTCAGAAAGAGGTTCACGAAGATTGACAAGCTTGCAGAGTCACCAGAGCATAGACGGATGTCCTGATACTCCAGTTCATAGTTCCTGTCCTACAACAGTCTTAATACTTGTTTTTCACGCTGGTAGTGTACTTGATGCAAATGTTGACATGACTGCAAAGAAATCTGACGTCACTACATTTAAAGGAGCCTTTGAATCGGTTATGCGTCAACACTATCCCACTCTTGTGGGACACATTACTATAAAATTAGTTTCGTGTCCTTCTCTCTGTACAGAGGCTCTTGGAGTATTATCTACTCTGAGTCCCTACAGCTTTGATTGCTCCCCATCTACAGTAGATAGTCCATCTCTGACAAATGATCTCATTCCGATAGGTGCTATACCACTTATCGCAACCTCCTCTCCAGAGTATCATGAATATGTAACTAAAACTATCACGGCTGCAAATGTTGTTTATAATGATTTTATCAAGTCAGATGATGGAAAAGGTTTTAACGGTCAGGTCTGTATTGTTGGTGACAGTATGGGCTCTATATTAGCATATGACGCTTTGTGTCGAACTTTACAATATCAGTCACGACATGATAGTGAAAATAGTATATTAGATACTGAAATAACCATCCGTAACGAGCCATCAGAACATTACTTAAATAAATCTCATCTTCAAGCTCCGACGCCAAGAAGACGATCGTCTACAGCCAGCGACAATCAAACAAAGTTGGAATTTGAAGTTAGTGACTTCTTTACCTTTGGGAGTCCGCTCTCACTTATACTAGCTTCAAGAAAAATATCAGATGACAAATTTAAAGATCTCACGAAGCCACCTGTCCAACAAATATATAACTTATTTCACCCAACGGATCCTGTCGCGTCTAGATTGGAACCATTGCTTTCAGCAAGATTTAGTAATCTAGCACCGATTAATGTAGCTAGATACGCTAAGTATCCTCTGGGTAACGGACAACCATACCATTTGATGGAGCTTATACACACTCATCCGACGTTATTCGGCGACCACCTACCAATGCCACCTACTCCTGTTTTAAGAAGACTTTCTGAAGCATCAGTGCAAAGTACAGTTAGTGGTTTAGTGGATAATATACCATTGATCACAATGAATGCCCTCCAACAAAAATGGTGGGGCACGAAGCGATTGGACTATGCCCTTTATTGCCCCGAAGGGTTAACAAACTTCCCTATGAATGCTTTGCCGCATCTATTTCATGCAAGCTACTGGGAAAGTTCGGATGTTATTGCTTTTATATTGAGACAAGTGGGTCATTTTGATTTGGCTCTATATGGTCAACAAGAAGATAAAGACTGTTCTCTGTTTAAACCAGGACAGGATAAGGAAAAGTGGATGAGGAAACGTACATCGGTTAAATTAAAAAATGTCGCAGCCAACCATAGAGCCAATGACGTGATTGTCGGCGAGGGCTGTCCACAAACGTTCATTGCTAGATTTATGTACGGGCCTTTAGATATGATTACATTGACCGGGGAGAAAGTAGATATACATATGATAAGAGACCCGCCTGCTGGTGAATGGACTTTATTATCAACAGTTGTGACTGACAAAACTGGAAGGATTACTTACACACTGACTGATAAGCAAAGCGTCGGATGTGGTATCTATCCCGTCCGAGCAGTCGTACGTGGTGATCATACTAGTTGCAACTTCCATCTAGCTGTGATACCTCCACAAACGGAGTGTGTAGTATTCAGTATTGACGGATCTTTCACGGCGAGTGTTTCGGTTACTGGTCGAGATCCGAAGGTGAGGGCTGGTGCTGTGGATGTCGTACGTTTCTGGCAGGATCTCGGTTATCTCATCCTGTATATAACAGGAAGGCCGGATATGCAACAAAGGAAAGTCGTCTCCTGGTTAGCGGAACATAATTTTCCTCACGGTTTAGTCTTTTTCTCGGACGGATTCTCCACCGATCCCTTGGGTCACAAAGCGGCGCATCTACACAGTCTCATAACCGAACATGGAGTTATATTCCAAGCAGCCTACGGTTCGGGTAAAGATATCAACGTGTACCACAACTGTGGTTTGCCGCAGAAGCAAATATATGCGATTGGTAAGATTAGTAAGAAATATAATAACCTAGCGACAACCTTGAATGACGGTTACGCTTCTCATTTGGCGGACTTGAAGCAACCAGGGGCTGTGAGGCCGGCCAGGGGGAACGCCAGACTTCTCGTACCGCGGCGTCTACTCGCATCAGTAAGTAATTCCTCTTCCCGTGGACGTCGCTGA

Protein sequence:

>DPOGS214066-PA
MLIKEYRIPLPLTVEEYRIAQLYMIAKKSREESSGEGSGVEIIVNEPYDNGPGGNGQYTQKIYHVGSHLPGWFKSLLPKSALTVSEEAWNAYPYTKTRYTCPFVEKFSLEIETYYFADNGHQENVFKLSGSDLKNRAVDIIDVVKDQLYGADYVKEEDPKIFVSQKCNRGPLSESWLEDYWREVQGKTQPLPNGKSLMCAYKLCRVEFRYWGMQTKLEKFIHDVALRKTMLRAHRQAWAWQDEWHGLTMDDIREIERQTQLALQKKMAGDVGEDTDLSEENSKSLAATMSSLEKNEDTASPVSVKKGMEKRVQKQLSPESTPPSEPKSCSKSNLRSSSSGSLKSLQVQVASWRMETLVRESETETGSEDEFYDCESSFNKWSSMCSLDEGDIDISPTQGDLNQEDSIFNPTFLKRVTSERGSRRLTSLQSHQSIDGCPDTPVHSSCPTTVLILVFHAGSVLDANVDMTAKKSDVTTFKGAFESVMRQHYPTLVGHITIKLVSCPSLCTEALGVLSTLSPYSFDCSPSTVDSPSLTNDLIPIGAIPLIATSSPEYHEYVTKTITAANVVYNDFIKSDDGKGFNGQVCIVGDSMGSILAYDALCRTLQYQSRHDSENSILDTEITIRNEPSEHYLNKSHLQAPTPRRRSSTASDNQTKLEFEVSDFFTFGSPLSLILASRKISDDKFKDLTKPPVQQIYNLFHPTDPVASRLEPLLSARFSNLAPINVARYAKYPLGNGQPYHLMELIHTHPTLFGDHLPMPPTPVLRRLSEASVQSTVSGLVDNIPLITMNALQQKWWGTKRLDYALYCPEGLTNFPMNALPHLFHASYWESSDVIAFILRQVGHFDLALYGQQEDKDCSLFKPGQDKEKWMRKRTSVKLKNVAANHRANDVIVGEGCPQTFIARFMYGPLDMITLTGEKVDIHMIRDPPAGEWTLLSTVVTDKTGRITYTLTDKQSVGCGIYPVRAVVRGDHTSCNFHLAVIPPQTECVVFSIDGSFTASVSVTGRDPKVRAGAVDVVRFWQDLGYLILYITGRPDMQQRKVVSWLAEHNFPHGLVFFSDGFSTDPLGHKAAHLHSLITEHGVIFQAAYGSGKDINVYHNCGLPQKQIYAIGKISKKYNNLATTLNDGYASHLADLKQPGAVRPARGNARLLVPRRLLASVSNSSSRGRR-