DPOGS214073 | ||
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Transcript | DPOGS214073-TA | 573 bp |
Protein | DPOGS214073-PA | 190 aa |
Genomic position | DPSCF300171 + 371432-372316 | |
RNAseq coverage | 25994x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL012891 | 2e-105 | 96.32% |   |
Bombyx | BGIBMGA010571-TA | 3e-105 | 96.32% |   |
Drosophila | RpL9-PB | 7e-85 | 78.84% |   |
EBI UniRef50 | UniRef50_Q963B7 | 2e-102 | 96.32% | 60S ribosomal protein L9 n=23 Tax=Eukaryota RepID=RL9_SPOFR |
NCBI RefSeq | NP_001037144.1 | 8e-104 | 96.32% | ribosomal protein L9 [Bombyx mori] |
NCBI nr blastp | gi|315115335 | 2e-104 | 97.89% | ribosomal protein L9 [Euphydryas aurinia] |
NCBI nr blastx | gi|315115335 | 6e-100 | 97.89% | ribosomal protein L9 [Euphydryas aurinia] |
Group | ||||
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Gene Ontology | GO:0005840 | 1.8e-118 | ribosome | |
GO:0006412 | 1.8e-118 | translation | ||
GO:0003735 | 1.8e-118 | structural constituent of ribosome | ||
GO:0019843 | 1.8e-118 | rRNA binding | ||
KEGG pathway | tca:663651 | 3e-96 |   | |
  | K02940 (RP-L9e, RPL9) | maps-> | Ribosome | |
InterPro domain | [1-189] IPR000702 | 1.8e-118 | Ribosomal protein L6 | |
[86-186] IPR020040 | 3.6e-41 | Ribosomal protein L6, alpha-beta domain | ||
Orthology group | MCL11486 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214073-TA
ATGAAGCAAATCGTTGCTAATCAAAAAGTGAAAATCCCTGAGGGGTTGACTGTTCATGTGAAATCTCGTCTAGTGACAGTGAAAGGTCCCCGAGGTGTTTTAAAAAGGAATTTCAAACACTTGGCAGTTGACATTCGCATGGTGAACCCTCGGTTATTGAAGGTTGAGAAATGGTTTGGTTCCAAGAAAGAGCTCGCCGCAGTAAGAACTGTATGCTCTCATGTTGACAACATGATCAAGGGTGTGACAAAGGGTTTCCAATACAAAATGCGTGCTGTATATGCCCATTTCCCCATCAACTGTGTCACAACGGAAGGTAACTCTGTAATTGAGATCCGTAATTTCTTGGGAGAGAAATACATCAGGAGGGTAAAGATGGCACCAGGGGTAACTGTTGTCAACTCCACAAAACAAAAGGACGAGCTGATCATTGAAGGCAATTCTATTGAAGATGTCTCCAGCTCGGCCGCCCTTATACAACAATCCACGACTGTCAAAAACAAGGATATCAGAAAGTTCTTGGACGGTCTCTATGTGTCTGAGAAAACTACTGTAGTACCAGACGAAATATAA
>DPOGS214073-PA
MKQIVANQKVKIPEGLTVHVKSRLVTVKGPRGVLKRNFKHLAVDIRMVNPRLLKVEKWFGSKKELAAVRTVCSHVDNMIKGVTKGFQYKMRAVYAHFPINCVTTEGNSVIEIRNFLGEKYIRRVKMAPGVTVVNSTKQKDELIIEGNSIEDVSSSAALIQQSTTVKNKDIRKFLDGLYVSEKTTVVPDEI-