Monarch geneset OGS2.0

DPOGS214094
TranscriptDPOGS214094-TA2517 bp
ProteinDPOGS214094-PA838 aa
Genomic positionDPSCF300014 - 2220155-2241541
RNAseq coverage62x (Rank: top 68%)
Annotation
HeliconiusHMEL0114251e-14154.48% 
BombyxBGIBMGA006151-TA5e-3427.22% 
Drosophila% 
EBI UniRef50UniRef50_P185641e-0725.94%Integrin beta-6 n=58 Tax=Euteleostomi RepID=ITB6_HUMAN
NCBI RefSeqXP_001895610.13e-1030.68%Integrin beta pat-3 precursor [Brugia malayi]
NCBI nr blastpgi|1705812706e-0930.68%Integrin beta pat-3 precursor [Brugia malayi]
NCBI nr blastxgi|750645862e-1325.59%integrin subunit beta-6 [Ovis aries]
Group
Gene OntologyGO:00083056.6e-06integrin complex
GO:00071606.6e-06cell-matrix adhesion
GO:00071556.6e-06cell adhesion
GO:00048726.6e-06receptor activity
GO:00072296.6e-06integrin-mediated signaling pathway
GO:00054886.6e-06binding
KEGG pathwayrno:3110612e-08 
 K06589 (ITGB6)maps-> Dilated cardiomyopathy
    Regulation of actin cytoskeleton
    Arrhythmogenic right ventricular cardiomyopathy (ARVC)
    Hypertrophic cardiomyopathy (HCM)
    Focal adhesion
    ECM-receptor interaction
InterPro domain[414-433] IPR0148366.6e-06Integrin beta subunit, cytoplasmic
Orthology groupMCL25212 Lepidoptera specific
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214094-TA
ATGGCGTCTGTGTGGTTCACGGTGACAGTTCTTGTCTGTATAAATCAAGTATTAGCAAGTTACCGCGATTGCTCGAATTTGGATAATATTAAAAATTGCAATGAATGCATCCGTTGCGGAGCACATTGGTGCAATAATCCACATGAGAACCGTCGCTGTTCGTTGGAGCGTTTCGACAACTGGTGTCCCAATCATCAAGAGAGCTTGCCGTACCTCACTGAAATCAGTGAAAAGGGAAAGATCTTAAATCCCAAGTACAGAGTCCAAACTATCCACGTGGGTCAAGAAGATGAGATTGACATCGTATACCAGTATAAAGCTGGTGAACCGAAGGTCAACTTCGTCGCAAACTCGACGCAAAAATCGAATTTCATCATCAGTAAATCCACGAGCTGTGCGTCTGGCTCGTGTACAACGACACTGAACACAATACCGGAGACGGACTTCTGCGAGAATACTGGAAGTACGAACGAGTTCTTTAACGTCAAACTGACGGTTAGCGATGTCGAGGAGGAAGCCGTTCTGAAGTTCCATGTACCTTGTGCTTGTGGTTGCACTGAAAAGGTTGAAAAACTGTCCCCTACTTGCAATGGCCGGGGTGACCTCTCGTGCGGCGTGTGCACATGTCAAGACAAATGGTCGGGCACTTTCTGTGATCAACCAATTTGTGATGAAAAACGCGGGGACGTACCATGTATAGATTCATCGAGGAGCAGTGTCGAATGTTTCGGGAACGGAGTTTGCGGTCGTTGCGACAAATGCGAGTGTTTCACAAACAGACCCGGCTCTAGGTACTTTGACAGGAACGATTACTGCATAGACATCTGTACCAAAACAAATGAATGCGACGAATGCCTTATAAAACCACATCTAGGGAAATGCCACGAATGCCATTTTCCACTACACAAACAGAGCTACAATGAATCATTGACGAGCGCTAAAGACGAATATGGGCGACACATGTGGATAAAATGCAACGATACTATCAATGATTGTAACATTGAATATGTTGTGATGAGAGACGATAGAGGGGAATCTTACTTCATGGTGACCAAGAACTGTGATCCCAAACAGGAGGGCCAGGAGAGCGCTAAAGTTAACCTAACAGTGCCGATTCTGCTCGGTCTGGTGGCTGTGCTAGCTGCAGCTAGTGCTGTCGGCTACTTCGTGTACAAAAGTCGTCCGCCGCCCGTACCGCTCACAGACCCAATGTACACCAACATTGGAGCTGAAGACTGCACCGGAGAGAACCCCCTGTATAAGCCGCCCACGTCCTCCTTCAAGAATCCCACGTACGGCAAGTGTACAGCCATAAAAAGACATCCTATAAGCGCCTGGCCATGTTTGTTGCGATCGAACCGTCGCTGTTCGTTGGAGCGTTTCGACAACTGGTGTCCCAATCATCAAGAGAGCTTGCCGTACCTCACTGAAATCAGTGAAAAGGGAAAGATCTTAAATCCCAAGTACAGAGTCCAAACTATCCACGTGGGTCAAGAAGATGAGATTGACATCGTATACCAGTATAAAGCTGGTGAACCGAAGGTCAACTTCGTCGCAAACTCGACGCAAAAATCGAATTTCATCATCAGTAAATCCACGAGCTGTGCGTCTGGCTCGTGTACAACGACACTGAACACAATACCGGAGACGGACTTCTGCGAGAATACTGGAAGTACGAACGAGTTCTTCAATGTCAAACTGACGGTTAGCGATGTCGAGGAGGAAGCCGTTCTGAAGTTCCATGTACCTTGTGCTTGTGGTTGCACTGAAAAGGTTGAAAAACTGTCCCCTACTTGCAATGGCCGGGGTGACCTCTCGTGCGGTGTGTGCACATGTCAAGACAAATGGTCGGGCACTTTCTGTGATCAACCAATTTGTGATGAAAAACGCGGGGACGTACCATGTATAGATTCATCGAGGAGTAGTGTCGAATGTTTCGGGAACGGAGTTTGCGGTCGTTGCGACAAATGCGAGTGTTTCACAAACAGACCCGGCTCTAGGTACTTTGACAGGAACGATTACTGCATAGACATCTGTACCAAAACAAATGAATGCGACGAATGCCTTATAAAACCACATCTAGGGAAATGCCACGAATGCCATTTTCCACTACACAAACAGAGCTACAATGAATCATTGACGAGCGCTAAAGACGAATATGGGCGACACATGTGGATAAAATGCAACGATACTATCAATGATTGTAACATTGAATATGTTGTGATGAGAGACGATAGAGGGGAATCTTACTTCATGGTGACCAAGAACTGTGATCCCAAACAGGAGGGCCAGGAGAGCGCTAAAGTTAACCTAACAGTCCCGATTCTGCTCGGTCTGGTGGCTGTGCTAGCTGCAGCTAGTGCTGTCGGCTACTTCGTGTACAAAAGTCGTCCGCCGCCCGTACCGCTCACAGACCCAATGTACACCAACATTGGAGCTGAAGACTGCACCGGAGAGAACCCCCTGTATAAGCCGCCCACGTCCTCCTTCAAGAATCCCACGTACGGCAAGTGGTAG

Protein sequence:

>DPOGS214094-PA
MASVWFTVTVLVCINQVLASYRDCSNLDNIKNCNECIRCGAHWCNNPHENRRCSLERFDNWCPNHQESLPYLTEISEKGKILNPKYRVQTIHVGQEDEIDIVYQYKAGEPKVNFVANSTQKSNFIISKSTSCASGSCTTTLNTIPETDFCENTGSTNEFFNVKLTVSDVEEEAVLKFHVPCACGCTEKVEKLSPTCNGRGDLSCGVCTCQDKWSGTFCDQPICDEKRGDVPCIDSSRSSVECFGNGVCGRCDKCECFTNRPGSRYFDRNDYCIDICTKTNECDECLIKPHLGKCHECHFPLHKQSYNESLTSAKDEYGRHMWIKCNDTINDCNIEYVVMRDDRGESYFMVTKNCDPKQEGQESAKVNLTVPILLGLVAVLAAASAVGYFVYKSRPPPVPLTDPMYTNIGAEDCTGENPLYKPPTSSFKNPTYGKCTAIKRHPISAWPCLLRSNRRCSLERFDNWCPNHQESLPYLTEISEKGKILNPKYRVQTIHVGQEDEIDIVYQYKAGEPKVNFVANSTQKSNFIISKSTSCASGSCTTTLNTIPETDFCENTGSTNEFFNVKLTVSDVEEEAVLKFHVPCACGCTEKVEKLSPTCNGRGDLSCGVCTCQDKWSGTFCDQPICDEKRGDVPCIDSSRSSVECFGNGVCGRCDKCECFTNRPGSRYFDRNDYCIDICTKTNECDECLIKPHLGKCHECHFPLHKQSYNESLTSAKDEYGRHMWIKCNDTINDCNIEYVVMRDDRGESYFMVTKNCDPKQEGQESAKVNLTVPILLGLVAVLAAASAVGYFVYKSRPPPVPLTDPMYTNIGAEDCTGENPLYKPPTSSFKNPTYGKW-