Monarch geneset OGS2.0

DPOGS214117
TranscriptDPOGS214117-TA1737 bp
ProteinDPOGS214117-PA578 aa
Genomic positionDPSCF300014 - 1684447-1687466
RNAseq coverage184x (Rank: top 49%)
Annotation
HeliconiusHMEL0113930.074.43% 
BombyxBGIBMGA001335-TA0.068.64% 
DrosophilaCG10463-PA1e-16047.96% 
EBI UniRef50UniRef50_E2BNW90.050.81%tRNA-dihydrouridine synthase 3-like n=1 Tax=Harpegnathos saltator RepID=E2BNW9_HARSA
NCBI RefSeqXP_393458.32e-17453.02%PREDICTED: similar to dihydrouridine synthase 3-like [Apis mellifera]
NCBI nr blastpgi|3407296640.053.12%PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase 3-like [Bombus terrestris]
NCBI nr blastxgi|3407296640.052.80%PREDICTED: LOW QUALITY PROTEIN: tRNA-dihydrouridine synthase 3-like [Bombus terrestris]
Group
Gene OntologyGO:00171508.6e-188tRNA dihydrouridine synthase activity
GO:00506608.6e-188flavin adenine dinucleotide binding
GO:00551148.6e-188oxidation-reduction process
GO:00080338.6e-188tRNA processing
GO:00081522.6e-60metabolic process
GO:00038242.6e-60catalytic activity
KEGG pathway 
InterPro domain[152-563] IPR0012698.6e-188tRNA-dihydrouridine synthase
[242-478] IPR0137852.6e-60Aldolase-type TIM barrel
Orthology groupMCL13396 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214117-TA
ATGACTAGTGTTAACTCCGGTGTTTGTGACATTAAAAAAGAGTACGTTCTCAAGAAGGAAGAAAAAATTGTTAATGACGATGGTGTAAATAAACGAAAAATAAGTGAAAGTGATGAGTTTGAAGCTAAGAAAACTAAAACTGATAATAATAAAGAAGAAGCGAGTAGATGTAAAAGAAAAGGGCAAAATAAAGCCAGACCGAAAACTTTTCAAGATGATAAACAAAATAAACCATGTCCTAGCATAGTCAATTTAATATCCAAAGATGAGCTAAAGCCATGTCAGTTTAATAATTGTAAATATATTCATAATCCTCTAGACTACATCAAATCAAAATTACCTGATTTGGGAAATGATTGTCATTTATACAATACCAGAGGTAGATGTCCAAGAGGCATATCTTGTCGCTATGGTTCCTCTCATATTACAGATGAGGGTTTTAATATGGTTGATGAAGAAAAGGCCTCAAAATGGAAAGAAGATACCAAAAATACATTACAACACAGCATACAAATTCTCTTACAAAAACGAAAATATGACTTCTCTCTTTCAGAAAATCTAGTCAAATCTTTGGACATTAGAAAAAAAAAACAAATAAACAATCCCTCTAATGATTCCATAAATTCAGAGGAATTAAATGAAGACAATCACAAAATTGGACCAGTTCTTGATGAAGATATAGTGAAATTATTACCTAGAGAAAGAAAAAAAATTAACTGGACAGATAAATTATATCTAAGTCCCTTAACAACAGTTGGTAATCTACCATTTCGAAGAATTTGCAAGGAATATGGAGCAGATATCACATGTGGCGAAATGGCATTGTGTGAATCACTCCTGAAAGGCATGAAACAGGAATGGGCTTTAGTAAAGCGACATGAGTCTGAGGATTTATTTGGAGCCCAAATATGTGGAAATAATGCTTATGCAATTGGAAAAGTTTCACAGTTACTAAAGGAAAACACTGAACTTGATTTCATTGATCTAAATTTAGGTTGCCCAATAGATTTGGTGTATAAAAAAGGAGGTGGAAGTGGAATGATGCATAGAATTCCAGCCTTAGAATTATCAGTTAAAAGTGCCTCACAAATACTTGATATTCCATTTACTATAAAAATGAGAACTGGGGTATACCAGGATAAAAAAATTGCTCACACAATTATTCCTAAAGTAGTAGATTGGGGTGCTTCTCTTATAACACTGCATGGTCGATCGAGAGAAGCTAGATATACCAGATTAGCTGATTGGGAATATATAGAAGTATGTGCAAAAGCTGCCTCGCCATGCCCAGTTTATGGAAATGGAGATATTCTTAGTTATGAAGATTATGTCAACAGTAGAAAAACAGCTCCAAATATCCAAGGAGTCATGATAGGTAGGGGTGCCCTTATAAAACCATGGATATTCAATGAAATAAAAGAACAAAAGCTTTATGACATAAGTAGTCATGAGAGATTTGAAATTATCAAAAAATTTACAAAATTTGGTTTGGAGCACTGGGGCTCTGATACGCAAGGTGTTGAAAATACACGTAGATTTCTTTTAGAATGGCTATCATTTTTATACAGATATATACCAGTTGGATTACTTGAAAGACCACCGCAAAAAATTAATGAACGACCTCCTTTGTACTTTGGCCGTAATGACTTAGAAACTTTAATGGCCTCTGGAAATTGTGCTGACTGGATTCCTCCCGAGATTTACCGCCTTCTTCGTCGACGAGAATCACCATTATAG

Protein sequence:

>DPOGS214117-PA
MTSVNSGVCDIKKEYVLKKEEKIVNDDGVNKRKISESDEFEAKKTKTDNNKEEASRCKRKGQNKARPKTFQDDKQNKPCPSIVNLISKDELKPCQFNNCKYIHNPLDYIKSKLPDLGNDCHLYNTRGRCPRGISCRYGSSHITDEGFNMVDEEKASKWKEDTKNTLQHSIQILLQKRKYDFSLSENLVKSLDIRKKKQINNPSNDSINSEELNEDNHKIGPVLDEDIVKLLPRERKKINWTDKLYLSPLTTVGNLPFRRICKEYGADITCGEMALCESLLKGMKQEWALVKRHESEDLFGAQICGNNAYAIGKVSQLLKENTELDFIDLNLGCPIDLVYKKGGGSGMMHRIPALELSVKSASQILDIPFTIKMRTGVYQDKKIAHTIIPKVVDWGASLITLHGRSREARYTRLADWEYIEVCAKAASPCPVYGNGDILSYEDYVNSRKTAPNIQGVMIGRGALIKPWIFNEIKEQKLYDISSHERFEIIKKFTKFGLEHWGSDTQGVENTRRFLLEWLSFLYRYIPVGLLERPPQKINERPPLYFGRNDLETLMASGNCADWIPPEIYRLLRRRESPL-