DPOGS214138 | ||
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Transcript | DPOGS214138-TA | 225 bp |
Protein | DPOGS214138-PA | 74 aa |
Genomic position | DPSCF300014 - 1258416-1260557 | |
RNAseq coverage | 6x (Rank: top 87%) |
Annotation | ||||
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Heliconius | HMEL005004 | 1e-21 | 78.95% |   |
Bombyx | BGIBMGA006184-TA | 8e-21 | 79.59% |   |
Drosophila | usp-PA | 8e-11 | 50.00% |   |
EBI UniRef50 | UniRef50_O76202 | 4e-20 | 80.70% | Protein ultraspiracle homolog n=13 Tax=Ditrysia RepID=USP_CHOFU |
NCBI RefSeq | NP_001037470.1 | 3e-20 | 73.68% | protein ultraspiracle homolog [Bombyx mori] |
NCBI nr blastp | gi|189031270 | 1e-20 | 78.33% | ultraspiracle isoform 1 [Helicoverpa armigera] |
NCBI nr blastx | gi|48475404 | 3e-19 | 81.67% | USP [Plodia interpunctella] |
Group | ||||
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Gene Ontology | GO:0003707 | 3e-20 | steroid hormone receptor activity | |
GO:0005634 | 3e-20 | nucleus | ||
GO:0006355 | 3e-20 | regulation of transcription, DNA-dependent | ||
GO:0043401 | 3e-20 | steroid hormone mediated signaling pathway | ||
GO:0003700 | 3e-20 | sequence-specific DNA binding transcription factor activity | ||
GO:0003677 | 2e-10 | DNA binding | ||
KEGG pathway |   | |||
InterPro domain | [4-72] IPR008946 | 3e-20 | Nuclear hormone receptor, ligand-binding | |
[14-69] IPR000536 | 5.9e-11 | Nuclear hormone receptor, ligand-binding, core | ||
[19-40] IPR001723 | 2e-10 | Steroid hormone receptor | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214138-TA
ATGACGTCGAGCCGACACAGTACCGTGTCCGCTGTAGTCGACTTTAGTTGTAGTACCAGTAATAAACAGATCGCTGCATTAGTAGTATGGGCTCGTGACATACCACACTTCAGTCAGCTGGAGCTGGAAGACCAGGTCATACTGATCAAGGCCTCCTGGAACGAGCTCATGCTGTTCGCCATCGCCTGGAGGAGTATGGAGATGAAGACTTCAATAGAATTGTAA
>DPOGS214138-PA
MTSSRHSTVSAVVDFSCSTSNKQIAALVVWARDIPHFSQLELEDQVILIKASWNELMLFAIAWRSMEMKTSIEL-