| DPOGS214164 | ||
|---|---|---|
| Transcript | DPOGS214164-TA | 300 bp |
| Protein | DPOGS214164-PA | 99 aa |
| Genomic position | DPSCF300014 - 315978-317705 | |
| RNAseq coverage | 2490x (Rank: top 5%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006804 | 9e-43 | 93.75% | |
| Bombyx | BGIBMGA006209-TA | 7e-40 | 87.50% | |
| Drosophila | Sec61beta-PA | 3e-29 | 74.26% | |
| EBI UniRef50 | UniRef50_Q7PN12 | 9e-31 | 78.79% | AGAP011504-PA n=6 Tax=Culicidae RepID=Q7PN12_ANOGA |
| NCBI RefSeq | NP_001037632.1 | 3e-38 | 87.50% | transport protein Sec61 beta subunit [Bombyx mori] |
| NCBI nr blastp | gi|112983408 | 7e-37 | 87.50% | transport protein Sec61 beta subunit [Bombyx mori] |
| NCBI nr blastx | gi|112983408 | 3e-42 | 87.50% | transport protein Sec61 beta subunit [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | nvi:100113628 | 9e-35 | ||
| K09481 (SEC61B, SBH2) | maps-> | Phagosome | ||
| Vibrio cholerae infection | ||||
| Protein processing in endoplasmic reticulum | ||||
| Protein export | ||||
| InterPro domain | [3-100] IPR016482 | 2.5e-40 | Preprotein translocase Sec, Sec61-beta subunit, eukarya | |
| [55-94] IPR005609 | 1.6e-21 | Preprotein translocase Sec, Sec61-beta subunit | ||
| Orthology group | MCL13623 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214164-TA
ATGTTTCAGCCAGCCGCACCAAGCTCTACATCTGTGGGATCTGGAGGCCGATCGCCAACCAAGGCAACTGGTGTTCCACGTTCGTCAACCGGAGGCACTGTGAGACAACGTAAGTCAACCACGACAACAACAGCAGCCAGGAATCGCAGCACTGGTGCTGGAACCGGTGGAATGTGGCGTTTTTACACTGATGACTCCCCCGGCGTCAAAGTAGGTCCTGTGCCTGTACTTGTCATGTCTCTGCTATTCATTGCATCTGTGTTTATGCTGCACATTTGGGGAAAATACACCAGGGCCTAA
>DPOGS214164-PA
MFQPAAPSSTSVGSGGRSPTKATGVPRSSTGGTVRQRKSTTTTTAARNRSTGAGTGGMWRFYTDDSPGVKVGPVPVLVMSLLFIASVFMLHIWGKYTRA-