| DPOGS214203 | ||
|---|---|---|
| Transcript | DPOGS214203-TA | 360 bp |
| Protein | DPOGS214203-PA | 119 aa |
| Genomic position | DPSCF300014 + 205889-206520 | |
| RNAseq coverage | 1884x (Rank: top 7%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006821 | 6e-53 | 78.15% | |
| Bombyx | % | |||
| Drosophila | CG8680-PA | 9e-34 | 70.93% | |
| EBI UniRef50 | UniRef50_C4WS83 | 1e-34 | 71.91% | ACYPI000747 protein n=3 Tax=Neoptera RepID=C4WS83_ACYPI |
| NCBI RefSeq | XP_001945136.1 | 8e-36 | 73.03% | PREDICTED: similar to CG8680 CG8680-PA [Acyrthosiphon pisum] |
| NCBI nr blastp | gi|193688233 | 2e-34 | 73.03% | PREDICTED: probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like isoform 1 [Acyrthosiphon pisum] |
| NCBI nr blastx | gi|193688233 | 1e-34 | 73.03% | PREDICTED: probable NADH dehydrogenase [ubiquinone] iron-sulfur protein 6, mitochondrial-like isoform 1 [Acyrthosiphon pisum] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | api:100159370 | 3e-35 | ||
| K03939 (NDUFS6) | maps-> | Huntington's disease | ||
| Oxidative phosphorylation | ||||
| Alzheimer's disease | ||||
| Parkinson's disease | ||||
| InterPro domain | [66-116] IPR019401 | 2.8e-20 | Zinc finger, CHCC-type | |
| Orthology group | MCL15346 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214203-TA
ATGATTTCAGCAACGAGAGCGAGACAATTCGTGGGCTCTGTGAATTCTCGAACAATTTCTTTAACAATCCGTTGCATAACCAATAAAACAGAAGATGTTACCACACATACAGGCCAAAAATGGGAGTCTGATGATTATAGGTTGGCAAGATTTACTCTGGCTCCAAAGCAAGTAAATAAAAATTGGGCTGTAAATTTGATAGCACAAGTTCCACCAAAGGAGGTAACTGAACGTGTAGTTTGGTGTGATGGCGGCAGTGGTCCAGAAGGCCATCCAAGAGTCTATATTAATTTGGATAAACCTGGCAACCATTCTTGTGGCTACTGTGGACTTCGATTTGTCAAGAAAGATCATCATTAG
>DPOGS214203-PA
MISATRARQFVGSVNSRTISLTIRCITNKTEDVTTHTGQKWESDDYRLARFTLAPKQVNKNWAVNLIAQVPPKEVTERVVWCDGGSGPEGHPRVYINLDKPGNHSCGYCGLRFVKKDHH-