| DPOGS214212 | ||
|---|---|---|
| Transcript | DPOGS214212-TA | 513 bp |
| Protein | DPOGS214212-PA | 170 aa |
| Genomic position | DPSCF300014 + 334259-335343 | |
| RNAseq coverage | 488x (Rank: top 26%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL006800 | 2e-70 | 90.53% | |
| Bombyx | BGIBMGA005939-TA | 2e-65 | 86.31% | |
| Drosophila | c12.1-PA | 1e-41 | 60.51% | |
| EBI UniRef50 | UniRef50_C1C081 | 1e-42 | 61.21% | CWC15 homolog n=5 Tax=Pancrustacea RepID=C1C081_9MAXI |
| NCBI RefSeq | XP_972753.1 | 1e-57 | 78.82% | PREDICTED: similar to CWC15 homolog [Tribolium castaneum] |
| NCBI nr blastp | gi|322790156 | 4e-61 | 76.74% | hypothetical protein SINV_06604 [Solenopsis invicta] |
| NCBI nr blastx | gi|91083189 | 8e-67 | 78.82% | PREDICTED: similar to CWC15 homolog [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005681 | 1.9e-87 | spliceosomal complex | |
| GO:0000398 | 1.9e-87 | nuclear mRNA splicing, via spliceosome | ||
| KEGG pathway | tca:661505 | 3e-57 | ||
| K12863 (CWC15) | maps-> | Spliceosome | ||
| InterPro domain | [2-167] IPR006973 | 1.9e-87 | Cwf15/Cwc15 cell cycle control protein | |
| Orthology group | MCL15020 | Single-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214212-TA
ATGACGACAGCTGCTAGACCGACTTTTGATCCCGCAAGGGGTGGCACAGGACGAGGAGAAAAAGATCTTAGCGCTATATCACGTCAGTATTCTAGTAGGGATCTTCCAGGTCATACCAAACTTAAATACAGGGAGCAAGGTCAAGGGACCACAGAAGAATTGCGTGCACGTGATTTTCGCAAGGAACTTGACGAGAGAGAAAAAGAAATTAAGGGGCCTAGTTCTAGGAAACAAGTAGAACCACCTGTTAAGAGACTTAAAGTAGACCAAGTCCCAGCTGCAAGTCTTGATGCTGACGATCCACTTGAAGGAGATTCGTCTGATTCCGATGACTCAGATGATGATACAGCTGCGCTTTTGGCCGAACTTAACAAAATTAAAAAGGAGCGTGCCATTGAGCAAGCCAAAAAGGAAGCTGAGAAGAAACAAGAGGAAGAAAGGATAAGAATGGAAAATATTTTATCTGGAAATCCTTTGTTAAATTATTCCTCAGCAGCACAAAAAACGACTTAA
>DPOGS214212-PA
MTTAARPTFDPARGGTGRGEKDLSAISRQYSSRDLPGHTKLKYREQGQGTTEELRARDFRKELDEREKEIKGPSSRKQVEPPVKRLKVDQVPAASLDADDPLEGDSSDSDDSDDDTAALLAELNKIKKERAIEQAKKEAEKKQEEERIRMENILSGNPLLNYSSAAQKTT-