| DPOGS214275 | ||
|---|---|---|
| Transcript | DPOGS214275-TA | 438 bp |
| Protein | DPOGS214275-PA | 145 aa |
| Genomic position | DPSCF300014 + 1823538-1835960 | |
| RNAseq coverage | 174x (Rank: top 50%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011402 | 6e-45 | 87.88% | |
| Bombyx | BGIBMGA005989-TA | 8e-49 | 92.86% | |
| Drosophila | CG5708-PB | 9e-25 | 50.47% | |
| EBI UniRef50 | UniRef50_E0VJT3 | 6e-31 | 59.65% | LIM domain transcription factor LMO4, putative n=9 Tax=Eumetazoa RepID=E0VJT3_PEDHC |
| NCBI RefSeq | XP_972328.1 | 5e-35 | 66.96% | PREDICTED: similar to GA19074-PA [Tribolium castaneum] |
| NCBI nr blastp | gi|91082483 | 1e-33 | 66.96% | PREDICTED: similar to GA19074-PA [Tribolium castaneum] |
| NCBI nr blastx | gi|91082483 | 3e-34 | 66.96% | PREDICTED: similar to GA19074-PA [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008270 | 1.9e-13 | zinc ion binding | |
| KEGG pathway | ||||
| InterPro domain | [55-120] IPR001781 | 1.9e-13 | Zinc finger, LIM-type | |
| Orthology group | MCL20438 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214275-TA
ATGGGTGGAGCGCATTGCTGCGTCGCGCCCATGCAGTCTCGTAAACGGTGCCCGCTCGGTGAAAAACGACCGAACACAGAAACAACGACGCACAGCATCTGGAACTCTATTGCATTGTTACACAGACCGTCATACCTACGAGACGTAATGTTCGGTTCAAGCGGCGCGTGTGCAGCGTGCGGTCAGGCCATCCCCGCCAGCGAATTTGTGATGAGAACGAACGCTCCTCAACAACCCCTTCACGTCTTCCACATAAAGTGCTTCGCATGCTCCAAATGCGGGTCACACCTCATGCAAGGCGACAGGTACTACATGTTAGCGGGGTCACTAGTCTGCGAGCAAGATTGGCAGAAGCTGATGAAGAACGCGAACGCGGCGACGACCGGCGCGCCGGTGCGCAAGGGAAAGGTGGGACGCCCGCGGCGCTCGCGCGAATGA
>DPOGS214275-PA
MGGAHCCVAPMQSRKRCPLGEKRPNTETTTHSIWNSIALLHRPSYLRDVMFGSSGACAACGQAIPASEFVMRTNAPQQPLHVFHIKCFACSKCGSHLMQGDRYYMLAGSLVCEQDWQKLMKNANAATTGAPVRKGKVGRPRRSRE-