DPOGS214293 | ||
---|---|---|
Transcript | DPOGS214293-TA | 822 bp |
Protein | DPOGS214293-PA | 273 aa |
Genomic position | DPSCF300014 + 2340159-2341727 | |
RNAseq coverage | 22x (Rank: top 79%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL011436 | 1e-141 | 91.44% |   |
Bombyx | BGIBMGA006004-TA | 6e-114 | 85.07% |   |
Drosophila | Wnt6-PB | 2e-72 | 58.00% |   |
EBI UniRef50 | UniRef50_E2A0L7 | 7e-91 | 57.69% | Protein Wnt n=3 Tax=Camponotus floridanus RepID=E2A0L7_CAMFO |
NCBI RefSeq | XP_001603351.1 | 3e-93 | 61.45% | PREDICTED: similar to wingless-related MMTV integration site 6 homolog [Nasonia vitripennis] |
NCBI nr blastp | gi|322788669 | 4e-93 | 62.50% | hypothetical protein SINV_15820 [Solenopsis invicta] |
NCBI nr blastx | gi|322788669 | 1e-97 | 62.50% | hypothetical protein SINV_15820 [Solenopsis invicta] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0007275 | 3.8e-134 | multicellular organismal development | |
GO:0016055 | 3.8e-134 | Wnt receptor signaling pathway | ||
GO:0005576 | 3.8e-134 | extracellular region | ||
GO:0005102 | 3.8e-134 | receptor binding | ||
KEGG pathway | nvi:100119613 | 8e-93 |   | |
  | K00445 (WNT6) | maps-> | Basal cell carcinoma | |
  |   |   | Pathways in cancer | |
  |   |   | Wnt signaling pathway | |
  |   |   | Melanogenesis | |
  |   |   | Hedgehog signaling pathway | |
InterPro domain | [17-273] IPR005817 | 3.8e-134 | Wnt | |
Orthology group | MCL13262 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS214293-TA
ATGCTTCAGGATTTTATTTCTTTAGCCCCGGAGCGTGTGTCGAATCATACAAGAGAAACTGGGTTTGTGAATGCAATAACAGCCGCCGGCGTTACTTACGCTATTACACGGGCGTGTACAGCTGGTTCCCTCCTTGAATGCTCATGTGAAAAGGAAATTCCAAAACCTAGAAGAGGACGTGTTACTCAAGTACCCCAGCCGCCATCTCCAGTGCAAAAGGATAAATGGCAATGGGGTGGTTGTAGCGATAATGTTCGCTTTGGTCTACAGAAATCCAGAGAGTTTATGGACAGTCGATATAGGAAAAAAAGCGATATAAAAACATTGATTAAATTACACAACCACAATGCTGGGAGGTTGGCAATTAAAAATAATATGAAAGTGGAATGTAAATGTCATGGACTATCAGGGTCTTGCACGCTTCGTACATGTTGGTGGAGAATGCCAACGTTTAGAGAGGTGGGCGACCGTTTGAGAGATAAATTTGAGGGTGCAGCTAAGGTGATTTCAAATAATGACGGTGATAACTTTATGCCAGAAAGTCCAAATATCAAACGGCCTGGTAAGAAGGATATCATTTACTCTGAAGAATCACCCGATTTTTGTACATTTAATATGAAGACTGGATCTCTGGGAACAGAAGGGCGACAGTGTAACGTAAGTTCCGCTGGAACCGACAGCTGTGATCAACTTTGTTGTAGGAGGGGATACGTGCAAAATACCATCAGAGAAGCCGAAAATTGTAATTGTCAATTTAAATGGTGTTGCGAAGTGATTTGTGAGACTTGCTACGTTAAAAGAGATATACAAACGTGCCTTTAA
>DPOGS214293-PA
MLQDFISLAPERVSNHTRETGFVNAITAAGVTYAITRACTAGSLLECSCEKEIPKPRRGRVTQVPQPPSPVQKDKWQWGGCSDNVRFGLQKSREFMDSRYRKKSDIKTLIKLHNHNAGRLAIKNNMKVECKCHGLSGSCTLRTCWWRMPTFREVGDRLRDKFEGAAKVISNNDGDNFMPESPNIKRPGKKDIIYSEESPDFCTFNMKTGSLGTEGRQCNVSSAGTDSCDQLCCRRGYVQNTIREAENCNCQFKWCCEVICETCYVKRDIQTCL-