| DPOGS214307 | ||
|---|---|---|
| Transcript | DPOGS214307-TA | 423 bp |
| Protein | DPOGS214307-PA | 140 aa |
| Genomic position | DPSCF300020 - 1065794-1066294 | |
| RNAseq coverage | 1060x (Rank: top 12%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL003461 | 1e-49 | 64.29% | |
| Bombyx | BGIBMGA004112-TA | 6e-73 | 85.00% | |
| Drosophila | mRpL13-PA | 8e-59 | 68.57% | |
| EBI UniRef50 | UniRef50_Q9VJ38 | 9e-57 | 68.57% | 39S ribosomal protein L13, mitochondrial n=16 Tax=Diptera RepID=RM13_DROME |
| NCBI RefSeq | XP_319028.4 | 1e-60 | 76.43% | AGAP009908-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastp | gi|158298887 | 3e-59 | 76.43% | AGAP009908-PA [Anopheles gambiae str. PEST] |
| NCBI nr blastx | gi|158298887 | 3e-61 | 76.43% | AGAP009908-PA [Anopheles gambiae str. PEST] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.7e-51 | ribosome | |
| GO:0006412 | 1.7e-51 | translation | ||
| GO:0003735 | 1.7e-51 | structural constituent of ribosome | ||
| KEGG pathway | aga:AgaP_AGAP009908 | 3e-60 | ||
| K02871 (RP-L13, rplM) | maps-> | Ribosome | ||
| InterPro domain | [1-140] IPR005822 | 1.7e-51 | Ribosomal protein L13 | |
| [1-103] IPR023564 | 1.5e-27 | Ribosomal protein L13 domain | ||
| Orthology group | MCL15603 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214307-TA
ATGGGTATGCATAAGCCTATTTACCATCCTATGAACGATTGCGGAGATGTTGTGGTTTGTATAAACAGTCGAGACATCGCATTGCGAGGAGATGAGTGGAAGAAGAGAGCGTATTTCCATCACACTGGTTATCCAGGTGGAGCTACGTGGACTTTAGCCTGGGAAGTGCACAATAAAGATCCCACTATGATAATCAAAAAAGCTGTATACAGATCAATGAAGGGCAATCTCCAACGACGTCACACAATGGAACGACTTCTCATTTATCCAGACGAGGAAGTGCCAGAAGATGTATTACAGAATGTAACAAACCAAATTCGTCAACTACGTTTAGTGCCGACAAGACTTGACCATATACCTGAAGATGAAGTCAGAAAGTTCCCCAAGGTCATGGACTATCCAAAAGATTATGTTTATAAATAA
>DPOGS214307-PA
MGMHKPIYHPMNDCGDVVVCINSRDIALRGDEWKKRAYFHHTGYPGGATWTLAWEVHNKDPTMIIKKAVYRSMKGNLQRRHTMERLLIYPDEEVPEDVLQNVTNQIRQLRLVPTRLDHIPEDEVRKFPKVMDYPKDYVYK-