| DPOGS214368 | ||
|---|---|---|
| Transcript | DPOGS214368-TA | 657 bp |
| Protein | DPOGS214368-PA | 218 aa |
| Genomic position | DPSCF300020 + 752305-755815 | |
| RNAseq coverage | 59x (Rank: top 68%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010545 | 6e-42 | 54.27% | |
| Bombyx | BGIBMGA003980-TA | 2e-70 | 92.65% | |
| Drosophila | Ric-PA | 7e-77 | 70.53% | |
| EBI UniRef50 | UniRef50_E0VQH6 | 1e-70 | 63.89% | GTP-binding protein Rit2, putative n=5 Tax=Arthropoda RepID=E0VQH6_PEDHC |
| NCBI RefSeq | XP_395139.1 | 4e-84 | 73.66% | PREDICTED: similar to Ras which interacts with Calmodulin CG8418-PA [Apis mellifera] |
| NCBI nr blastp | gi|383850802 | 2e-84 | 73.71% | PREDICTED: GTP-binding protein Rit1-like [Megachile rotundata] |
| NCBI nr blastx | gi|383850802 | 2e-81 | 73.71% | PREDICTED: GTP-binding protein Rit1-like [Megachile rotundata] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0016020 | 8.3e-113 | membrane | |
| GO:0007165 | 8.3e-113 | signal transduction | ||
| GO:0006184 | 8.3e-113 | GTP catabolic process | ||
| GO:0005525 | 8.3e-113 | GTP binding | ||
| GO:0003924 | 8.3e-113 | GTPase activity | ||
| GO:0007264 | 1.2e-47 | small GTPase mediated signal transduction | ||
| GO:0015031 | 2.4e-30 | protein transport | ||
| GO:0005622 | 3.1e-10 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [11-213] IPR020849 | 8.3e-113 | Small GTPase superfamily, Ras type | |
| [15-176] IPR001806 | 1.2e-47 | Small GTPase superfamily | ||
| [14-178] IPR003579 | 2.4e-30 | Small GTPase superfamily, Rab type | ||
| [14-169] IPR005225 | 8e-27 | Small GTP-binding protein domain | ||
| [16-178] IPR003578 | 3.1e-10 | Small GTPase superfamily, Rho type | ||
| Orthology group | MCL11210 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214368-TA
ATGGCGGAGGCTGCGGGCACATCGCGCGGCCTCCGCGTCTACAAGATCGTGGTGCTGGGTGACGGAGGAGTTGGCAAGTCCGCGGTCACCTTGCAGTTTGTTAGCCACAGCTTCTTGGACTATCATGATCCCACTATCGAGGATTCATACCAACAACAAGCAGTCATTGACGGTGAGCCAGCTCTATTGGACATCTTGGATACTGCAGGACAGGTAGAGTTCACGGCTATGCGGGAACAGTACATGCGTTGTGGTGAAGGTTTTATGCTGTGCTACTCGGTGACGGACAGGCGATCGTTTCGCGCGGCTGGTGAATACCAGCGGCTCTTGGCCCACGCTAGACCTAACGAGTCGCTGCCAATAGTACTGGTGGGGAATAAACTGGACCTAGCGCCGAGGTTCAGACAGGTAACAACTGATGAAGGTAAAGCCCTAGCGAGTCAGTTGGGGTGTCCTTTCTTCGAGACGTCAGCCGCTCTCCGTCACTTCGTGGACGACGCCTTCCACGCCCTCGTGAGGGAGATAAGACGTTTAGACAGACAGAGACAGCCTCCTCCCTGTGTGACGTCATCTGGTGGTCGCCGTCGGTGGCGTCGCCTCCGCAGCATCTTCGCCTTCGTGTTCCGAAGACGGCGCCGTCACCACTCCTCTCCATAA
>DPOGS214368-PA
MAEAAGTSRGLRVYKIVVLGDGGVGKSAVTLQFVSHSFLDYHDPTIEDSYQQQAVIDGEPALLDILDTAGQVEFTAMREQYMRCGEGFMLCYSVTDRRSFRAAGEYQRLLAHARPNESLPIVLVGNKLDLAPRFRQVTTDEGKALASQLGCPFFETSAALRHFVDDAFHALVREIRRLDRQRQPPPCVTSSGGRRRWRRLRSIFAFVFRRRRRHHSSP-