Monarch geneset OGS2.0

DPOGS214382
TranscriptDPOGS214382-TA567 bp
ProteinDPOGS214382-PA188 aa
Genomic positionDPSCF300020 + 938416-941272
RNAseq coverage4311x (Rank: top 3%)
Annotation
HeliconiusHMEL0033592e-6964.02% 
BombyxBGIBMGA004009-TA1e-7466.14% 
DrosophilaCG12203-PA1e-5158.90% 
EBI UniRef50UniRef50_D6WRS03e-5861.85%NADH dehydrogenase (Ubiquinone) Fe-S protein 4 n=13 Tax=Coelomata RepID=D6WRS0_TRICA
NCBI RefSeqXP_975662.16e-5961.85%PREDICTED: similar to NADH:ubiquinone dehydrogenase, putative [Tribolium castaneum]
NCBI nr blastpgi|910873951e-5761.85%PREDICTED: similar to NADH:ubiquinone dehydrogenase, putative [Tribolium castaneum]
NCBI nr blastxgi|910873953e-5761.85%PREDICTED: similar to NADH:ubiquinone dehydrogenase, putative [Tribolium castaneum]
Group
Gene OntologyGO:00229009e-82electron transport chain
GO:00166519e-82oxidoreductase activity, acting on NADH or NADPH
GO:00057439e-82mitochondrial inner membrane
KEGG pathwaytca:6645732e-58 
 K03937 (NDUFS4)maps-> Huntington's disease
    Oxidative phosphorylation
    Alzheimer's disease
    Parkinson's disease
InterPro domain[33-188] IPR0068859e-82NADH dehydrogenase ubiquinone Fe-S protein 4, mitochondrial
Orthology groupMCL12367 Single-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214382-TA
ATGCTGCAAGTTATTAATACTGCGGGCAGGCTGGCTAGGTCTAATGTTTGCCGATCCTTGTTGCCATTTTCAACAAGTTCTGCAAGACCATCAGACGATCCTATGAATCGTAAGGAGGCTCCTATTCTGGACAACGAATCTGTACTAGCTCTTCCCCACCAAGTAAGGCAGAAGAAAGTCCAAGCCGCCAGCATAAATGTCCCTGTACAGGTTGACATTACACCAATAACTGGAATACCGGAGGAGCATGTGCGCACTCGCAGAGTAAGAATCTATCAGCCACCAAAGAACGCTATGCAGAGCGGCACCAACAACACCCATCATTGGGAAATGGAATTTGATAATCGCCAGCGTTGGGAGAATCCTCTCATGGGCTGGACATCAACCGGCGATCCTCACTCCAACTTGAAATTGCAATTTACCTCCCCCGACGAAGCCATACAGCATTGCGAGAAAAATGGTTGGGTGTGGTACATTGATGCTCCCAAACTTGAAAAGGAATTCAAACCCAAAAGCTATGGAATTAACTTCTCCTGGAATCGCCGCACCCGAGTATCTACTAAGTGA

Protein sequence:

>DPOGS214382-PA
MLQVINTAGRLARSNVCRSLLPFSTSSARPSDDPMNRKEAPILDNESVLALPHQVRQKKVQAASINVPVQVDITPITGIPEEHVRTRRVRIYQPPKNAMQSGTNNTHHWEMEFDNRQRWENPLMGWTSTGDPHSNLKLQFTSPDEAIQHCEKNGWVWYIDAPKLEKEFKPKSYGINFSWNRRTRVSTK-