| DPOGS214393 | ||
|---|---|---|
| Transcript | DPOGS214393-TA | 426 bp |
| Protein | DPOGS214393-PA | 141 aa |
| Genomic position | DPSCF300069 - 540387-543151 | |
| RNAseq coverage | 689x (Rank: top 19%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL008226 | 3e-45 | 84.76% | |
| Bombyx | BGIBMGA011372-TA | 3e-65 | 84.40% | |
| Drosophila | CG5869-PA | 3e-43 | 55.97% | |
| EBI UniRef50 | UniRef50_Q1HPS3 | 1e-62 | 84.40% | Glia maturation factor beta n=5 Tax=Endopterygota RepID=Q1HPS3_BOMMO |
| NCBI RefSeq | NP_001093274.1 | 2e-63 | 84.40% | glia maturation factor beta [Bombyx mori] |
| NCBI nr blastp | gi|153791457 | 5e-62 | 84.40% | glia maturation factor beta [Bombyx mori] |
| NCBI nr blastx | gi|153791457 | 6e-65 | 84.40% | glia maturation factor beta [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003779 | 7.1e-17 | actin binding | |
| GO:0005622 | 7.1e-17 | intracellular | ||
| KEGG pathway | ||||
| InterPro domain | [1-141] IPR011171 | 2.2e-66 | Glia maturation factor beta | |
| [13-140] IPR002108 | 7.1e-17 | Actin-binding, cofilin/tropomyosin type | ||
| Orthology group | MCL15474 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214393-TA
ATGTCGGGTCAGAACGTTAACGTCTGTGATATTGGTGAAGATGTTAAGGAAAAACTAAAGAAGTTCCGTTTCCAAAAACACACTTCGAACTGTGCTCTGATATTAAAGGTGAACAGGGACAAACAAGCGCTGGAAGTGGATGATGAATTAGACAATATAGAGCTGGAGGACCTGCAGGAGATACTCCCGTCACATCAGCCCAGGTTTATAGTTTACAGCTATAAGCTGGAACACACGGACGGACGGATATCATTCCCGATGTGTTTCATATTCTACACGCCGCGGGACGCTCACATGGAGCTGCAGGTGATGTACGCTGGAACACAACGTGCCTTAGCTGCTGCTGTAGGGGCTCCGAGGCTGTTGGAAGTCAGAGAGATTGACGATCTCACTAACGAATGGCTCAACGACAAACTTAAAAGATAG
>DPOGS214393-PA
MSGQNVNVCDIGEDVKEKLKKFRFQKHTSNCALILKVNRDKQALEVDDELDNIELEDLQEILPSHQPRFIVYSYKLEHTDGRISFPMCFIFYTPRDAHMELQVMYAGTQRALAAAVGAPRLLEVREIDDLTNEWLNDKLKR-