| DPOGS214436 | ||
|---|---|---|
| Transcript | DPOGS214436-TA | 546 bp |
| Protein | DPOGS214436-PA | 181 aa |
| Genomic position | DPSCF300069 + 666886-675721 | |
| RNAseq coverage | 28x (Rank: top 76%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL010616 | 1e-23 | 55.24% | |
| Bombyx | BGIBMGA008482-TA | 6e-24 | 47.37% | |
| Drosophila | Dbx-PC | 7e-57 | 90.43% | |
| EBI UniRef50 | UniRef50_D2A5M5 | 6e-60 | 71.60% | Developing brain homeobox n=1 Tax=Tribolium castaneum RepID=D2A5M5_TRICA |
| NCBI RefSeq | XP_002428141.1 | 2e-56 | 79.41% | Homeobox protein CHOX-E, putative [Pediculus humanus corporis] |
| NCBI nr blastp | gi|270009243 | 2e-59 | 71.60% | developing brain homeobox [Tribolium castaneum] |
| NCBI nr blastx | gi|270009243 | 1e-59 | 71.60% | developing brain homeobox [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0003677 | 8.3e-27 | DNA binding | |
| GO:0006355 | 8.3e-27 | regulation of transcription, DNA-dependent | ||
| GO:0043565 | 3e-22 | sequence-specific DNA binding | ||
| GO:0003700 | 3e-22 | sequence-specific DNA binding transcription factor activity | ||
| GO:0005515 | 1.5e-21 | protein binding | ||
| GO:0005634 | 2e-06 | nucleus | ||
| KEGG pathway | ||||
| InterPro domain | [24-96] IPR012287 | 8.3e-27 | Homeodomain-related | |
| [37-99] IPR001356 | 3e-22 | Homeobox | ||
| [28-106] IPR009057 | 1.5e-21 | Homeodomain-like | ||
| [66-75] IPR000047 | 2e-06 | Helix-turn-helix motif, lambda-like repressor | ||
| [59-70] IPR020479 | 3.4e-06 | Homeobox, eukaryotic | ||
| Orthology group | MCL19667 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214436-TA
ATGTTCGTCTGTCCTCGTCCAGTCCGTCCCGCGCAGGCTCACACCCAGGTGTTCCCACTCCCCGGAGGCTTCCCATGGGCTCACAGCTCCAGAGGCAAACCCCGGCGCGGTATGATGCGCCGCGCGGTGTTCTCTGACCTCCAACGTAAAGGTCTGGAGAAGAGATTCCAGCTCCAGAAGTACATCAGCAAGCCGGACAGGAAGAAGCTAGCTGAGAAACTGGGCCTCAAGGATAGTCAGGTGAAGATCTGGTTCCAGAACCGTCGCATGAAGTGGAGGAACTCCAAGGAGCGCGAGCTGCTCGCGTCTGGCGGCTCCCGGGAGCAGACCCTCCCCAACAAGAACAACCCCCACCCGGACCTGTCCGACGCGGAGGTGGACCGCCACAAGCTGTCTCCACCGCCCGATGACGACAAGTACGGGCCAGCGCCCACACACGCGCCCGAGCCCCGGGGCTTCAGGGAGCACGCCTTCACCGCCGCGGACGAGGCCGACGAGTACTACAGCGATCCCAGCGCCTCCGACGAGGAGATCAACGTCACATGA
>DPOGS214436-PA
MFVCPRPVRPAQAHTQVFPLPGGFPWAHSSRGKPRRGMMRRAVFSDLQRKGLEKRFQLQKYISKPDRKKLAEKLGLKDSQVKIWFQNRRMKWRNSKERELLASGGSREQTLPNKNNPHPDLSDAEVDRHKLSPPPDDDKYGPAPTHAPEPRGFREHAFTAADEADEYYSDPSASDEEINVT-