| DPOGS214458 | ||
|---|---|---|
| Transcript | DPOGS214458-TA | 480 bp |
| Protein | DPOGS214458-PA | 159 aa |
| Genomic position | DPSCF300441 + 39723-40798 | |
| RNAseq coverage | 8x (Rank: top 86%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL012473 | 7e-31 | 45.67% | |
| Bombyx | BGIBMGA009578-TA | 3e-90 | 95.60% | |
| Drosophila | CG11107-PA | 2e-81 | 84.18% | |
| EBI UniRef50 | UniRef50_Q7K3M5 | 2e-79 | 84.18% | CG11107 n=16 Tax=Eukaryota RepID=Q7K3M5_DROME |
| NCBI RefSeq | XP_392081.2 | 6e-84 | 88.61% | PREDICTED: similar to CG11107-PA isoform 1 [Apis mellifera] |
| NCBI nr blastp | gi|91077430 | 1e-82 | 87.42% | PREDICTED: similar to ATP-dependent RNA helicase [Tribolium castaneum] |
| NCBI nr blastx | gi|91077430 | 1e-81 | 87.42% | PREDICTED: similar to ATP-dependent RNA helicase [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| KEGG pathway | ame:408535 | 1e-83 | ||
| K12820 (DHX15, PRP43) | maps-> | Spliceosome | ||
| InterPro domain | [25-128] IPR011709 | 2.3e-29 | Domain of unknown function DUF1605 | |
| Orthology group | ||||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214458-TA
ATGGATGACCCCCACTGGTGTTACGACAACTTCATCAACTACAGGTCACTCAAGTCTGGTGATAATGTCCGGCAACAACTCAGCAGGATCATGGACAGGTTCAACCTGAAGAGGACGAGCACCGAGTTCACAAGCAAAGACTACTACATTAATATAAGGAAAGCTCTCGTCAATGGCTTCTTTATGCAAGTGGCGCACCTAGAGCGGACCGGCCACTACCTGACGGTGAAAGACAACCAGCAGGTCCAACTGCACCCCTCCACGTGTCTAGACCACAAGCCCGACTGGGTCATATACAACGAGTTCGTGCTCACCACCAAGAACTACATACGAACAGTCACCGACATCAAACCGGAGTGGTTGCTCCGGATCGCCCCGCAGTACTATGAGTTGTCCAACTTCCCGCCGTGCGAGGCGCGGAGGCAGCTGGAACTGCTGCAAGCGAGGCTCGATTCCAAACTGTACCAGGAGGGGTTCTAG
>DPOGS214458-PA
MDDPHWCYDNFINYRSLKSGDNVRQQLSRIMDRFNLKRTSTEFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTVKDNQQVQLHPSTCLDHKPDWVIYNEFVLTTKNYIRTVTDIKPEWLLRIAPQYYELSNFPPCEARRQLELLQARLDSKLYQEGF-