DPOGS214466 | ||
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Transcript | DPOGS214466-TA | 639 bp |
Protein | DPOGS214466-PA | 212 aa |
Genomic position | DPSCF300122 - 643868-648436 | |
RNAseq coverage | 225x (Rank: top 44%) |
Annotation | ||||
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Heliconius | HMEL003745 | 1e-07 | 79.41% |   |
Bombyx | BGIBMGA013352-TA | 2e-33 | 68.05% |   |
Drosophila | % |   | ||
EBI UniRef50 | UniRef50_D6W8F2 | 7e-16 | 42.54% | Nuclear factor 1 n=2 Tax=Tribolium castaneum RepID=D6W8F2_TRICA |
NCBI RefSeq | XP_971603.1 | 1e-16 | 42.54% | PREDICTED: similar to Nuclear factor I CG2380-PB [Tribolium castaneum] |
NCBI nr blastp | gi|270014496 | 2e-15 | 42.54% | hypothetical protein TcasGA2_TC001775 [Tribolium castaneum] |
NCBI nr blastx | gi|270014496 | 2e-25 | 40.81% | hypothetical protein TcasGA2_TC001775 [Tribolium castaneum] |
Group | ||||
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Gene Ontology | GO:0005634 | 1.7e-06 | nucleus | |
GO:0006355 | 1.7e-06 | regulation of transcription, DNA-dependent | ||
GO:0006260 | 1.7e-06 | DNA replication | ||
GO:0003700 | 1.7e-06 | sequence-specific DNA binding transcription factor activity | ||
KEGG pathway |   | |||
InterPro domain | [46-132] IPR000647 | 1.7e-06 | CTF transcription factor/nuclear factor 1 | |
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214466-TA
ATCCCTCACAGCTCGGCGGGCCTGAGCGGCCAGTCGCCTCTCGTTCCTTCCAACACCATCTTCTACCAGCACGCCCCGGCCGCCGACACTCACTCCACTCCGTCGGAGTCTCTGAACCAGCACGGGAAATACGAGGGCGGTCAGGACTCGCTCGGGGACTTCGTGACCTTCGTGTGTCAGGAGCCGCCCGCGGACGTGCAGCAGCTACAGGTGCACAGCCTGTCTCGTAGTCCCAAACCGCCGTACTTCAGCAGCTCGATGCTGCCCCCGCCCCCGCTCCCGCCCATGGCCAGGCCGGTCACCATCATCAGATCCACGGCGAGCGAGGCGGGCGGGGGCGGCGGATCCCCCTCGTCCCCGGAGCTGCGCTCGCCGCCCGCGTCTCCGCGCCGCCGCTCCCCTCACTACCGGGACTGCGCCCCCATCAGCCACTTCAACCACTTCCACCAGCCGCAGCAGGTCTGTGTTCAGTTACGGTGCTGTGGGAGGGAGCTCTCCCCCGGGGGGACTCGGCCTGTACGCGCCGCGGGCAGCTCCTCGCGCTCCGCCACGATGGAACGCGCCCTTCCCCACGCTGGAGGACGAGTTCAACATCATGACGGCGCCCGCCGGACCCGACCACGTCGTGTTGCTGGATGA
>DPOGS214466-PA
IPHSSAGLSGQSPLVPSNTIFYQHAPAADTHSTPSESLNQHGKYEGGQDSLGDFVTFVCQEPPADVQQLQVHSLSRSPKPPYFSSSMLPPPPLPPMARPVTIIRSTASEAGGGGGSPSSPELRSPPASPRRRSPHYRDCAPISHFNHFHQPQQVCVQLRCCGRELSPGGTRPVRAAGSSSRSATMERALPHAGGRVQHHDGARRTRPRRVAG-