Monarch geneset OGS2.0

DPOGS214501
TranscriptDPOGS214501-TA2562 bp
ProteinDPOGS214501-PA853 aa
Genomic positionDPSCF300122 + 439919-461798
RNAseq coverage59x (Rank: top 68%)
Annotation
HeliconiusHMEL0042290.068.38% 
BombyxBGIBMGA013346-TA2e-18068.50% 
DrosophilaCa-alpha1D-PC0.065.50% 
EBI UniRef50UniRef50_Q242700.065.50%Voltage-dependent calcium channel type D subunit alpha-1 n=66 Tax=Eumetazoa RepID=CAC1D_DROME
NCBI RefSeqXP_001231059.20.065.17%Anopheles gambiae str. PEST AGAP012434-PA [Anopheles gambiae str. PEST]
NCBI nr blastpgi|1582963620.065.17%Anopheles gambiae str. PEST AGAP012434-PA [Anopheles gambiae str. PEST]
NCBI nr blastxgi|3454863200.067.67%PREDICTED: voltage-dependent calcium channel type D subunit alpha-1-like [Nasonia vitripennis]
Group
Gene OntologyGO:00160202e-56membrane
GO:00550852e-56transmembrane transport
GO:00068112e-56ion transport
GO:00052162e-56ion channel activity
GO:00052459.5e-38voltage-gated calcium channel activity
GO:00068169.5e-38calcium ion transport
GO:00519259.5e-38regulation of calcium ion transport via voltage-gated calcium channel activity
GO:00058919.5e-38voltage-gated calcium channel complex
GO:00160212.7e-19integral to membrane
KEGG pathwayaag:AaeL_AAEL0112800.0 
 K05315 (CACNA1N)maps-> MAPK signaling pathway
InterPro domain[222-449] IPR0058212e-56Ion transport
[304-319] IPR0020779.5e-38Voltage-dependent calcium channel, alpha-1 subunit
[212-230] IPR0054462.7e-19Voltage-dependent calcium channel, L-type, alpha-1 subunit
Orthology groupMCL10068 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214501-TA
ATGGCCTTAGCTGAAGTCCTATTCAAGCTGTTAAGAGTTCTGTCGGAAAGATACGTACAAGCTGGAACTATCTCTGTTACAAATATAGCTCTTGGTCTACTCGGTTACCATAACCAAGCATATATGAATAGAACTGTGAGCAGTGCACCAGGTGCCAGGCACCAGGTCTTGACCTGGGATTATCATAAACTGCCCTCGATGGAACTACTTCCATATGAAGCAGCTGCAGGAGGCGTTAAGTGTAACACGACACAACCGTTCAAGGAAGCCAATGACCCAGTGCTAGAGACGGGAAGTGCTGCATTGCAGTTAAAAATTACGGTTCAAACCCGCATTGGATACGTAAGAATGGCGGATCAAGTTCAAGTAACCGATGCCACGACGCCGGACGCCGAGGCGCCAGACACTGGCCAGGCCGCCGCCAAGCCACAGCCACGGAAACAGGCAAGGCCAAGAGGGAAGCCACAACCAGAGAAGCCTGAAAGAAGTCTGTTCTGTCTAGGGAAAAAGAATCCGATAAGAAAATTTTGCTATGACGTAATCGAATGGAAACCGTTCGAATATATGATATTGACAACGATATTCGCCAATTGCATAGCGCTGGCTGTCTTCACCCCCTACCCTGCAGGGGACACAAACAACACAAATCAAATATTGGAAAAGGTGGAATGGATTTTTATGGCCATCTTCACCTGCGAGTGCGTGATGAAGATTATAGCTTACGGATTCCTGTTTCATCCTGGCGCCTATCTCAGGAATACTTGGAACAGTCTCGACTTCACTATTGTGACGATTGGTATAGCCAGTCAGATACTTCAAAACATTTCAAAAGACCTATTCGATGTAAAAGCATTGAGAGCCTTTAGAGTGCTTCGTCCTCTGCGATTGGTTTCGGGAGTTCCAAGTCTTCAAATCGTGCTCAACTCAATATTGAAGGCGATGGTGCCATTATTCCACATCGCGTTCCTCGTGTTGTTCGTCATCATCATCTACGCTATCATAGGACTCGAGCTGTTCTCGGGTGTTTTGCATGACACCTGTTTTGACAACGTCACTAAGAAGATGGTGGAAGAGCCAACTCCGTGCTCCAGAGACGCCGATGTTGGGAATCACTGTGAGGAGGGTCAGATCTGTCGTGACTATTGGCTTGGACCAAACTTCGGGATCACCAACTTCGACAACATCGGATACTCCATGCTGACGGTGTTCCAGTGCATCACACTCGAGGGCTGGACAGACATTATGTACGCCATAGCAGATGTAAAAGGCAACACGTGGGTGTGGATATATTTTGTGTCATTGGTTATTTTTGGAAATTTCTTTGTTATGAACCTTATTCTTGGTGTCTTATCTGGAGAATTTTCGAAGGAAAGAGAGAAGGCAAAAAATCGTGGAGATTTCCAGAAATCTCGTGAAAGGCAACAATTCGAAGAAGATCTGAAAGGATATTTGAACTGGATCACTGTTGCCGAGGAGTTGGATCTTGAGAATGATCAAGGACAGAAGGAGGAAGATCGAGACGCTCAAGGAAACAAAAAAGAGCGCAGAAGTAATGATGGCTCACAGAGTAACGTTAACGGAGACCCGCCAACCACAGTTTCTTGCAAGATATATTGCAGAAGATTTGATAAGGTGAATCGTCGTATGCGTCGCGCGTGTCGTAAGGCGGTCAAGTCCCAGACGTTCTACTGGGCTATCATCGTACTCGTCTTCCTGAACACTTTAGTGCTGGCCACAGAACACTACGGTCAAGAGCCCTGGCTAGATCACTTCCAGAATTATGCTAACGTGCTGTTTGTGGTCCTGTTTTCCACTGAGATGCTCGTCAAGATGTACGCTTTGGGATTTCAGGGCTACTTCGTGTCTCTCTTCAACCGATTCGATTGCTTCGTGATGGTGTGTTCTATTGTGGAGCTTGGTCTCACGTACACCAACAACATACCGCAGCTTGGGATCTCCGTGTTGCGATGCGTTCGGCTGCTGAGGGTCTTCAAGGTCACCAAGTATTGGCGATCTCTATCAAACCTCGTGGCGTCTCTTCTAAATTCGATCCAGTCAATTTTCTCTCTCCTCCTTCTACTGTTCCTCTTCATCATGATATTTGCCCTCCTTGGCATGCAGGTATTCGGTGGAAGATTTGACTACGCAGCGGAAGAACAAAAAGAGAGACATAATTTTGACTCCTTCTGGCAGGCCGTGCTGACAATGTTTCAGATTCTAACCGGCGAGGATTGGAACGTCGTGATGTATCATGGCATCAACGCGTACGGAGGCGTCGGCACGCCGGGCATGTTGGCGTCTATATACTTCATCATAATATTCATTTGCGGCAACTATATTCTTTTGAACGTGTTCTTGGCTATCGCGGTCGACAACTTAGGTGACGCTGAAGATATGGATGAAGAGATTGTTAAGGAGAAGGAGGACGCTGATAATCCAGAAGCAGGTAATCCACAACTGGATGAAGAAAGAGGTGAGACAGACGACGAGTACGTCAACGAAGAAGAAGGGTATTCCAGTGAGGGCCGGAAGTATAAAGCGTATAAAAGAGTTGCGGGGTAA

Protein sequence:

>DPOGS214501-PA
MALAEVLFKLLRVLSERYVQAGTISVTNIALGLLGYHNQAYMNRTVSSAPGARHQVLTWDYHKLPSMELLPYEAAAGGVKCNTTQPFKEANDPVLETGSAALQLKITVQTRIGYVRMADQVQVTDATTPDAEAPDTGQAAAKPQPRKQARPRGKPQPEKPERSLFCLGKKNPIRKFCYDVIEWKPFEYMILTTIFANCIALAVFTPYPAGDTNNTNQILEKVEWIFMAIFTCECVMKIIAYGFLFHPGAYLRNTWNSLDFTIVTIGIASQILQNISKDLFDVKALRAFRVLRPLRLVSGVPSLQIVLNSILKAMVPLFHIAFLVLFVIIIYAIIGLELFSGVLHDTCFDNVTKKMVEEPTPCSRDADVGNHCEEGQICRDYWLGPNFGITNFDNIGYSMLTVFQCITLEGWTDIMYAIADVKGNTWVWIYFVSLVIFGNFFVMNLILGVLSGEFSKEREKAKNRGDFQKSRERQQFEEDLKGYLNWITVAEELDLENDQGQKEEDRDAQGNKKERRSNDGSQSNVNGDPPTTVSCKIYCRRFDKVNRRMRRACRKAVKSQTFYWAIIVLVFLNTLVLATEHYGQEPWLDHFQNYANVLFVVLFSTEMLVKMYALGFQGYFVSLFNRFDCFVMVCSIVELGLTYTNNIPQLGISVLRCVRLLRVFKVTKYWRSLSNLVASLLNSIQSIFSLLLLLFLFIMIFALLGMQVFGGRFDYAAEEQKERHNFDSFWQAVLTMFQILTGEDWNVVMYHGINAYGGVGTPGMLASIYFIIIFICGNYILLNVFLAIAVDNLGDAEDMDEEIVKEKEDADNPEAGNPQLDEERGETDDEYVNEEEGYSSEGRKYKAYKRVAG-