Monarch geneset OGS2.0

DPOGS214502
TranscriptDPOGS214502-TA3351 bp
ProteinDPOGS214502-PA1116 aa
Genomic positionDPSCF300122 + 462335-474565
RNAseq coverage117x (Rank: top 58%)
Annotation
HeliconiusHMEL0037514e-12162.06% 
BombyxBGIBMGA013403-TA0.071.71% 
DrosophilaCa-alpha1D-PC0.059.64% 
EBI UniRef50UniRef50_Q24270-40.059.64%Isoform C of Voltage-dependent calcium channel type D subunit alpha-1 n=14 Tax=Coelomata RepID=Q24270-4
NCBI RefSeqXP_002089976.10.059.83%GE21343 [Drosophila yakuba]
NCBI nr blastpgi|1954754080.059.83%GE21343 [Drosophila yakuba]
NCBI nr blastxgi|1953431040.059.69%GM18655 [Drosophila sechellia]
Group
Gene OntologyGO:00160206e-56membrane
GO:00550856e-56transmembrane transport
GO:00052166e-56ion channel activity
GO:00068116e-56ion transport
KEGG pathwaydya:Dyak_GE213430.0 
 K05315 (CACNA1N)maps-> MAPK signaling pathway
InterPro domain[458-690] IPR0058216e-56Ion transport
[830-858] IPR0148731.7e-17Voltage-dependent calcium channel, alpha-1 subunit, IQ domain
Orthology groupMCL10068 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214502-TA
ATGTCCGATTTTGAAAACACAGTATACTATCCGCTTATAAAAAAAGCAGATTCTCCGCCCAAGCGACAACCAACAATATCAGCTCGACCGAGAAGACTCTCCGAGGTGGAGATCAAGACCCAGGAGAAGCCGATACCTGATGGCAGCAGCTTTTTCATCTTTTCTAAAACTAATTGGTTCCGAGTCACGTGTTACAAAATCCAAAACAATTCTTGGTTTAGAAATTTGATTCTGCTTTGCATTTTGGCGTCGTCACTGATGTTGGCAATGGAAGATCCCGTTGGGAGGAAGGGCAATGAGAACTGGAGTGAAATGCTTCGTAAGATCGACTACGTGTTCACAACCGTGTTCACGGTCGAGCTGGTGTTGAAGCTGATCACCTACGGGTTCATCTTCCACAAGGACGCCTTCTGTCGGTCCGCTTTTAACTTGTTAGATCTGCTGGTGGTCATCGTGTCGCTTATATCTTCGAGCGGTAACAATAATGTGTCATACATAAAGATTTTGAGAGTATTCCGAGTGTTGAGACCACTCAGAGCCATCAATAGAGCGAAGGGACTAAAGCACGTAGTTCAGTGCGTGATCGTTGCTATAAAAACGATAGGCAACATTTTGCTGGTGACCAATCTTCTTCAGTTCATGTTCGCTGTAATGGGGGTGCAAATGTTCAAGTATGTTGTCAAGTGCGTTTTTGCTTCCATAAAATCAATTGGCAACATCTTCCTCATAAACCACATGTTGCAATTCATGTTCGCGGTTGTCGGTATACAATTATTCAAGGGTAAATTTTGTCAATGCACAGATAATTCCAAAGTGACGAGAGACGAGTGTCAAGGTTCTTATCTGATATACGAAAATGGTTCACCAAAGATCAAAGACAGGGTATGGATACGGAATAAGTTTAATTTCGATGACGTCCTGAGTGGGATGTTGACTTTGTTCACCGTATCCACATTCGAAGGATGGCCGGGCTTATTGTCAACCTCAATGGACTCCAATGAGGAGAACCATGGGCCGGTAGAGAACTCTCGACCGCTGGTGGCGTTCTTCTATATCAGCTACATCATTGTGATAGCATTCTTTATGGTTAATATTTTCGTGGGTTTCGTCATAGTAACATTCCAAAAGGAGGGAGAACAGGAATTCAAAGATTGTGAACTTGACAAGAATCAAAGGAATTGTATCGAGTTTGCCCTCAAAGCTAAACCTGTCAGGAGGTACATTCCCAAGCACCGCATCCAGTACAAGACCTGGTGGTTCGTGACGTCACAGCGCTTCGAGTACGTCATTTTCTTCTTCATCGTCCTGAACACCATCGCTCTGATGATGAAGTATCACGACGCCAAGCCGGACTATAAAAGAGTCTTGGATTATCTGAATATGATACTGACGACAGTTTTCATGTTGGAGTTCGTGTTTAAGTTGGCTGCCTTCAGATTCAAGAACTACTTCGGTGACGCTTGGAACACGACTGATTTCATTCTGGTCGTCGGTAGCATTATAGACATTGTTGTCACACAGGTTAATGAGTATAAAGAACCGAATGAGTTCGGCTCAACGAAGGAAAGTAAAGAGGTACACGATAATGGAACACATTTAAAATACATAGCATTCTTCCGATTATTTCGTGCAATGAGACTTATAAAGCTACTGTCTCGGGGCGAGCGGATACGAACGTTACTGTGGACATTCATCAAGTCTTTCCAAGCCCTGCCGTATGTCGCCTTATTGATTGTCTTGTTGTTCTTCATCTACGCGGTGGTCGGTATGCAGTTGTTCGGCAAAGTTCAGGAAGACGATGAAATAATCACGAGGAACAACAACTTCCAAACATTCGGCGGCGCCTTGATGGTGTTGTTTAGATCAGCCACAGGCGAGGCATGGCAGGAGATAATGATGGCGTTGTCACCAAACGACTCGGAGCACCCTGGCGAGCCGGTTGGCTGTCTGCATGATGAAGGGGATCCGCCCTCGGAGGAGAGCTGCGGCACGCGCCTCGCATACCCTTACTTCATATCCTTCTCGTTGTTGTGTACTTTCCTGATTATTAACTTATTCGTGGCTGTCATTATGGACAACTTTGATTATTTGACACGAGATTGGTCCATTCTCGGACCTCATCATTTAGACGAGTTTGTGAGACTTTGGAGTGAATACGATCCAGATGCTAAAGGAAGAATTAAACACCTGGACATAGTGACGTTGTTAAGGAAAATAAGTCCACCGCTGGGTATGACTAGCTGTTTATCATACAACCCTCACAGGACAGCTTGCAAGCGTCTCGTGTCCATGAACATGCCTCTCAACTCTGACGGTACCGTCAACTTTAACGCCACATTGTTTGCCGTCGTAAGAACTCAGCTGCAGATAAAAACCACGGGTGTGATAGATGAATGCAATACTGAATTACGAGCCATCATAAAGAAGGTATGGAAGAGGACCTCGCCGAAGCTCTTGGACCAGGTGGTACCACCTCCTGGGGATCCTAACGAGATCACCGTCGGGAAGTTTTACGCCACCTTCCTCATACAAGATTACTTCCGAAGATTCCGTAAACGCAAGGAGCAAGCTGCTGCGGCGTCGGTTCAGACGAACCAGATGACGTTACAAGCAGGTCTCAGGACGCTGCACGAGGCTGGACCGGAACTCAAGCGAGCCATCTCCGGGAACCTGGACGAGGTCGTCGCCGAAACCGTAGAACCAATGCATAGACGTAATCACACACTTTTCGGCGCGGTGTGGACGAGCATCAAGAAGGGGCGGGAGAGCTTCTACCATCCCCCGCCCAATAGAGTCAAAACGACTTCGAATGGGAAGAAAGAGGGTCAGTCGTTGAGTTGGATGATGCAGAGAGAGTTGGGCCTCGATGGAAAAATCCCAGAAGATGAAAATAAATTCGAAGACATCAACCACAGTGACGGCGAAGAAGAGATAGCCATGCAACCCTTACTGCACGGGAAGGACTCCGAGAGGATATTCAAAGTTATCGAAAAAACATCCAACGATTTAATGCAGAGTTTGAGAAACAACTATCGTGACAGGATGCCACAAAACAGAAACAACGTGCCTTATTGTGTAGAAAACCCAGCGGAAAATCTTATTACTCGTGTTCTAACGGAGCAGGGTCTGGGCAAGTACTGTGACCGTGAGTTCGTCGCCAGCACCACCCGGGAGATGCAGGACGCCCTCGACCTCACGCAGGAGGAAATGGATGCCGCTGCTAATCAAATTATTTTGCAAGAAAGAAACATGAACCGGTCCCAAAGGCCTGATGATGTGGAGAGCATTCTGTGTCGTCAGTACCACCCGTTTCACCAGCCAGCCATTCATCCACCGGCGAAGCAGAAATAG

Protein sequence:

>DPOGS214502-PA
MSDFENTVYYPLIKKADSPPKRQPTISARPRRLSEVEIKTQEKPIPDGSSFFIFSKTNWFRVTCYKIQNNSWFRNLILLCILASSLMLAMEDPVGRKGNENWSEMLRKIDYVFTTVFTVELVLKLITYGFIFHKDAFCRSAFNLLDLLVVIVSLISSSGNNNVSYIKILRVFRVLRPLRAINRAKGLKHVVQCVIVAIKTIGNILLVTNLLQFMFAVMGVQMFKYVVKCVFASIKSIGNIFLINHMLQFMFAVVGIQLFKGKFCQCTDNSKVTRDECQGSYLIYENGSPKIKDRVWIRNKFNFDDVLSGMLTLFTVSTFEGWPGLLSTSMDSNEENHGPVENSRPLVAFFYISYIIVIAFFMVNIFVGFVIVTFQKEGEQEFKDCELDKNQRNCIEFALKAKPVRRYIPKHRIQYKTWWFVTSQRFEYVIFFFIVLNTIALMMKYHDAKPDYKRVLDYLNMILTTVFMLEFVFKLAAFRFKNYFGDAWNTTDFILVVGSIIDIVVTQVNEYKEPNEFGSTKESKEVHDNGTHLKYIAFFRLFRAMRLIKLLSRGERIRTLLWTFIKSFQALPYVALLIVLLFFIYAVVGMQLFGKVQEDDEIITRNNNFQTFGGALMVLFRSATGEAWQEIMMALSPNDSEHPGEPVGCLHDEGDPPSEESCGTRLAYPYFISFSLLCTFLIINLFVAVIMDNFDYLTRDWSILGPHHLDEFVRLWSEYDPDAKGRIKHLDIVTLLRKISPPLGMTSCLSYNPHRTACKRLVSMNMPLNSDGTVNFNATLFAVVRTQLQIKTTGVIDECNTELRAIIKKVWKRTSPKLLDQVVPPPGDPNEITVGKFYATFLIQDYFRRFRKRKEQAAAASVQTNQMTLQAGLRTLHEAGPELKRAISGNLDEVVAETVEPMHRRNHTLFGAVWTSIKKGRESFYHPPPNRVKTTSNGKKEGQSLSWMMQRELGLDGKIPEDENKFEDINHSDGEEEIAMQPLLHGKDSERIFKVIEKTSNDLMQSLRNNYRDRMPQNRNNVPYCVENPAENLITRVLTEQGLGKYCDREFVASTTREMQDALDLTQEEMDAAANQIILQERNMNRSQRPDDVESILCRQYHPFHQPAIHPPAKQK-