DPOGS214523 | ||
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Transcript | DPOGS214523-TA | 447 bp |
Protein | DPOGS214523-PA | 148 aa |
Genomic position | DPSCF300287 - 98014-99227 | |
RNAseq coverage | 49211x (Rank: top 0%) |
Annotation | ||||
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Heliconius | HMEL010056 | 6e-74 | 89.86% |   |
Bombyx | BGIBMGA010970-TA | 4e-75 | 90.54% |   |
Drosophila | RpL26-PA | 1e-61 | 75.17% |   |
EBI UniRef50 | UniRef50_F4WTD7 | 4e-66 | 82.43% | 60S ribosomal protein L26 n=17 Tax=root RepID=F4WTD7_ACREC |
NCBI RefSeq | NP_001037233.1 | 1e-73 | 90.54% | ribosomal protein L26 [Bombyx mori] |
NCBI nr blastp | gi|315115475 | 2e-74 | 92.57% | ribosomal protein L26 [Euphydryas aurinia] |
NCBI nr blastx | gi|315115475 | 6e-72 | 92.57% | ribosomal protein L26 [Euphydryas aurinia] |
Group | ||||
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Gene Ontology | GO:0015934 | 3.2e-102 | large ribosomal subunit | |
GO:0006412 | 3.2e-102 | translation | ||
GO:0003735 | 3.2e-102 | structural constituent of ribosome | ||
KEGG pathway | nvi:100119535 | 7e-67 |   | |
  | K02898 (RP-L26e, RPL26) | maps-> | Ribosome | |
InterPro domain | [2-147] IPR005756 | 3.2e-102 | Ribosomal protein L26/L24P, eukaryotic/archaeal | |
[8-126] IPR014723 | 1.5e-45 | Ribosomal protein L24, SH3-like | ||
[8-127] IPR008991 | 5e-38 | Translation protein SH3-like | ||
[51-83] IPR005824 | 2e-08 | KOW | ||
Orthology group | MCL13167 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214523-TA
ATGAAGTACAATAAGCTGGTAACGTCCTCCAGGAGGAAAAACAGGAAGAGGCATTTCAGTGCTCCTTCCCACATCCGAAGAGTGCTTATGTCTGCACCACTCTCAAAGGAGCTTAAACAAAAATTCAATGTTAAGTCTATGCCAATCCGCAAGGACGATGAAGTACAGGTAGTACGTGGACATTACAAAGGCCAACAGATCGGTAAAGTAGTTCAGGTGTACCGTAAAAAGTTTGTCGTCTACATCGAGAGGATCCAGAGAGAAAAGGCCAACGGTGCCACCGCATATGTTGGCATCCATCCATCAAAGTGTGTTATCGTCAAACTGAAGATGAACAAAGATCGTAAGGCGATACTCGATCGCAGATCAAAGGGTAGACACCTGGCCACTGGAGGCGGAAAGGGAAAATACACTGAGGAACAAGCTACAGCTATGGAGACCTCGTGA
>DPOGS214523-PA
MKYNKLVTSSRRKNRKRHFSAPSHIRRVLMSAPLSKELKQKFNVKSMPIRKDDEVQVVRGHYKGQQIGKVVQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKDRKAILDRRSKGRHLATGGGKGKYTEEQATAMETS-