| DPOGS214543 | ||
|---|---|---|
| Transcript | DPOGS214543-TA | 357 bp |
| Protein | DPOGS214543-PA | 118 aa |
| Genomic position | DPSCF300266 - 274089-275949 | |
| RNAseq coverage | 512x (Rank: top 24%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL016124 | 2e-40 | 85.00% | |
| Bombyx | BGIBMGA003272-TA | 1e-37 | 65.71% | |
| Drosophila | CG13675-PC | 7e-26 | 52.43% | |
| EBI UniRef50 | UniRef50_Q29FD3 | 4e-26 | 52.38% | GA12452 n=1 Tax=Drosophila pseudoobscura pseudoobscura RepID=Q29FD3_DROPS |
| NCBI RefSeq | XP_001354269.2 | 5e-27 | 52.38% | GA12452 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastp | gi|198467137 | 1e-25 | 52.38% | GA12452 [Drosophila pseudoobscura pseudoobscura] |
| NCBI nr blastx | gi|270297212 | 1e-27 | 64.56% | cuticular protein analogous to peritrophins 1-F precursor [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0008061 | 3.8e-10 | chitin binding | |
| GO:0006030 | 3.8e-10 | chitin metabolic process | ||
| GO:0005576 | 3.8e-10 | extracellular region | ||
| KEGG pathway | ||||
| InterPro domain | [53-103] IPR002557 | 3.8e-10 | Chitin binding domain | |
| Orthology group | MCL16129 | Insect specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214543-TA
ATGACAGAATCAAGGACATGTATAAGGTTTTGCTGTGCGGGGATTATAGCTGTTTTGTTTTACATCATCGACAATTCAATGGCTTCTCTAGACGGATACATTCCCGGCGAAGATTATCCAGCATACGAGGAGGTTCCGCAGGGCCTGTCTTTCACCTGCGACGACAAAATACCTGGTTACTACGCTGACACGGAGACGATGTGCCAGGTCTGGCACTGGTGTGTACCCAGCATCGGTGGTAATCTCAAGTATTCCTTCATCTGTGCTCCGGGAACTGTCTTCAATCAGCAGAGCAGAGTTTGTGATTGGTTCTTCAAGTTAAATATCCTTGTCAAAATCAAGAGAGTAACTTATTAA
>DPOGS214543-PA
MTESRTCIRFCCAGIIAVLFYIIDNSMASLDGYIPGEDYPAYEEVPQGLSFTCDDKIPGYYADTETMCQVWHWCVPSIGGNLKYSFICAPGTVFNQQSRVCDWFFKLNILVKIKRVTY-