| DPOGS214643 | ||
|---|---|---|
| Transcript | DPOGS214643-TA | 588 bp |
| Protein | DPOGS214643-PA | 195 aa |
| Genomic position | DPSCF300050 + 693848-694874 | |
| RNAseq coverage | 117x (Rank: top 58%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL009107 | 1e-86 | 85.64% | |
| Bombyx | BGIBMGA005061-TA | 1e-75 | 89.26% | |
| Drosophila | Brf-PB | 5e-61 | 65.24% | |
| EBI UniRef50 | UniRef50_B7Q833 | 2e-64 | 61.29% | Transcription initiation factor IIB, putative n=1 Tax=Ixodes scapularis RepID=B7Q833_IXOSC |
| NCBI RefSeq | NP_001037055.1 | 1e-96 | 86.70% | TFIIB-related factor [Bombyx mori] |
| NCBI nr blastp | gi|160333889 | 2e-95 | 86.70% | TFIIB-related factor [Bombyx mori] |
| NCBI nr blastx | gi|160333889 | 1e-91 | 87.17% | TFIIB-related factor [Bombyx mori] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0006355 | 8.3e-90 | regulation of transcription, DNA-dependent | |
| GO:0008270 | 8.3e-90 | zinc ion binding | ||
| GO:0006352 | 8.3e-90 | transcription initiation, DNA-dependent | ||
| GO:0006413 | 6.3e-13 | translational initiation | ||
| GO:0003743 | 6.3e-13 | translation initiation factor activity | ||
| KEGG pathway | kcr:Kcr_1464 | 7e-15 | ||
| K03124 (TFIIB) | maps-> | Basal transcription factors | ||
| InterPro domain | [1-179] IPR000812 | 8.3e-90 | Transcription factor TFIIB | |
| [79-180] IPR013763 | 3.9e-27 | Cyclin-like | ||
| [5-45] IPR013137 | 4.7e-17 | Zinc finger, TFIIB-type | ||
| [93-161] IPR013150 | 6.3e-13 | Transcription factor TFIIB, cyclin-related | ||
| Orthology group | MCL10411 | Multiple-copy universal gene | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214643-TA
ATGTCGGGGAAAAAATGCAAACACTGTGGGTCATCAGAAATAGAAGTAGACCCTGCTAGAGGTGATGCCGTTTGTACCAACTGTGGTTCTGTATTAGAAGATAATATTATTGTTGCTGAAGTAGAATTCCAAGAGAATGCTCATGGTGGTGCTTCTGCAATCGGACAGTTTGTGTCAGCAGATTCAAAAGGAGGTGCCTCGGGTTTTGGTAGAGCATTTAATGCGGGCATTGGCCAAGAGTCAAGAGAAATAACATTGAGGAAGGCAAGAGAGGGTATCACTGCACTGTGTCAGCAGCTCAGATTGAATCAGCAGTGTATTGACATCGCTTGTAATTTCTTTAAGATGGCACTCGCTAGGCATCTCACTATCGGGAGGCAGTCAGCCCTAACACAAGCGGCATGCGTATATATTACTTGCAGGACAGAGGGAACACCTCATCTTCTTATAGACATCAGTGATGCTTTGCAGATAGATTGTTATCAACTGGGCCGTACATACTTCAAATTGTCAAAAGCACTCTGCATCAACATACCTCCAACTGGTAAGTGTAACTACATATTTTATGTTATCTATGCTTCATTATAG
>DPOGS214643-PA
MSGKKCKHCGSSEIEVDPARGDAVCTNCGSVLEDNIIVAEVEFQENAHGGASAIGQFVSADSKGGASGFGRAFNAGIGQESREITLRKAREGITALCQQLRLNQQCIDIACNFFKMALARHLTIGRQSALTQAACVYITCRTEGTPHLLIDISDALQIDCYQLGRTYFKLSKALCINIPPTGKCNYIFYVIYASL-