Monarch geneset OGS2.0

DPOGS214677
TranscriptDPOGS214677-TA2886 bp
ProteinDPOGS214677-PA961 aa
Genomic positionDPSCF300321 + 140810-149489
RNAseq coverage140x (Rank: top 55%)
Annotation
HeliconiusHMEL0076870.085.71% 
BombyxBGIBMGA001949-TA0.079.13% 
DrosophilaRbf-PA3e-8635.15% 
EBI UniRef50UniRef50_P287495e-15934.85%Retinoblastoma-like protein 1 n=32 Tax=Amniota RepID=RBL1_HUMAN
NCBI RefSeqXP_395096.32e-16635.47%PREDICTED: similar to retinoblastoma-like protein 1 isoform a [Apis mellifera]
NCBI nr blastpgi|3505949072e-16635.95%PREDICTED: retinoblastoma-like protein 1 [Sus scrofa]
NCBI nr blastxgi|3505949071e-16035.93%PREDICTED: retinoblastoma-like protein 1 [Sus scrofa]
Group
Gene OntologyGO:00056341.1e-37nucleus
GO:00517261.1e-37regulation of cell cycle
KEGG pathwayame:4116277e-166 
 K04681 (RBL)maps-> TGF-beta signaling pathway
    Cell cycle
InterPro domain[373-546] IPR0027201.1e-37Retinoblastoma-associated protein, A-box
[381-546] IPR0137632.6e-36Cyclin-like
[730-781] IPR0027191.8e-12Retinoblastoma-associated protein, B-box
Orthology groupMCL11366 Multiple-copy universal gene
Genotypes for resequenced monarchs and outgroup Danaus species

Nucleotide sequence:

>DPOGS214677-TA
ATGGCTAAACCAGAAGAAAGTGAAGAAAATTGGGTGGCCACTATGGACAATCTGTGCTCACAATTAAATGTTGATCCAGGTGCGGCGAAAAAATCAAAGGAATCATATTCGGAGATTAAACAAAATTATACATTGGACGGTGATGAGCTGCACTGGATGGCGTGCGCTCTATACGTCGCGTGTCGTACTTCTATCACGCCGACAGTGCAATCAGGAAAGGCTGTTGAGGGCAACTGTGTCAGCCTCACCAGACTTCTTAGACTATGTAACATAAGCCTTATCCAATTTTTCAACAAAATCAAGAACTGGATGGAAATGGCTTCAATGTCAACAGATTTTAAAGATAGGATAACTAGATTAGAACGTAAATTTGCAGTATCCACTGTACTTTTTAGAAAATTCCAACCAATATTTCAAGAAATATTCTCTGGTTTAACAAATGAACCAGTTAAAAGCAACACTAAAAGCAAGAAACAAAAGTTACAACCTTGTACAACAAATGCTTTATTTGAGTTCAGCTGGTGTTTATATGTGTGTGTGAAGGGAGAGTTCCACAACTCGGCCGATGATCTTGTTGATATGTATCATGTTTTATTGTCATGTCTTGACTTTGTTTTTGCTAATGCCTTCATGGCTAGACGCTATGATGTTATAAATCCTGCTTTCAAAGGCTTACCGTCAGATTGGCTTAAAGATGATTTTGAATTACCAAAAAAGCCACCCTGTATTATATCAGTGCTGTGTGAGATCAAGGAGGGATTGGCGGTTGAAGCCGCAACTATGAAGGAGTACAGTTGGAGACCTGTGATAAAGACGTTTTTTGACAAAGGAATTCTTAAAGGTAACAATGATCAACTGACAGGTTTACTTGACATCGGTAATTTTGATGCAAATCTAAAATCACTGAACAATTTATATGAAACCTATGTATTAAGTGTTGGCGAATTTGATGAGAGGATATTTTTGGGGGAGCATGCCAATGAACAGATTGGGACAAAGAATAAGGTTTCGGGGGATGAAATATCACAAGTCATAGCATCATTTGGACCCAGTTCTCGAGCATGTCCTGACACACCCCTAACGGGCAGACGTTACTTGGCGCGTCGTGAGGAGCTGACACCAGTATCAGAGGCCACCAACAGTCTAGCTCGACTGGCTGCCCTGCTGAGACAAGCACGACCCAAGCCCTCACCCACCTTATTAAGATTTTTCGCCGATTGCGGTGTGGATAAAGTGACTATAGTGAAGAATGTGGTGCAACCCTGTAATGGATGGATGGAGAAGTTCTCGGAGAGTCTGTCGGAGTGTAACTGCAGTAAGGAGACCATAGCGTTCAGGTGCAACATGGTTACATGCCTGTACTATAAAGTGTTTGAACACATCATAACGGAGGAGCACAGGAAGAAACCGCAGTTGTCATTACAGATTCTTCTGTCCCAGGAGACGTTCCAATTGACGGTGTACGCTTGTTGTACGGAGGTAGTCCTACATGCCTATGGAGTGCATTCCCTTCGTTTCCCGAGGGTCCTTCAGATATATGGTCTCAGTGCGTTCCACTTCTACAAGATCATTGAGCTGGTGGTGCAGGCCGTGGTGCAGAAACTGAGCCGGGATGTCATCAAACATCTCAATGCGATTCTTCTATCCCAGGAGACGTTCCAATTGACGGTGTACGCTTGTTGTACGGAGGTAGTCCTACATGCCTATGGAGTGCATTCCCTTCGTTTCCCGAGGGTCCTTCAGATATATGGTCTCAGTGCGTTCCACTTCTACAAGATCATTGAGCTGGTGGTGCAGGCCGTGGTGCAGAAACTGAGCCGGGATGTCATAAAACATCTCAATGCGGTTGAAGAGCAAGTCTTAGAATCATTAGTATGGACATCTGACAGTCCTCTCTGGGATCAGCTCAGCAAGAATCCCATACCGGCCGCCATTGAAGTATACGCACAAGATTCACCCAACAGAAGGAATGCCAGTGGTTTACAATCTCCGATATCAGCGGCCATAGATAGGTATTTAACACCGATGGCAGATCAAGCGAAGAAACAGCTCTTTAAGGATAACATCAAACCTGGACAATCACTGCTAGTTCAAACAAATAACAACGTTAAGCAGGAGCCACAACAAGTGCCGATTGTGTCAACAGCGGAGACCACACCCAACACAACACCCAAGAAAGCAAATAACTCATTAATACTTTTCTTCAGGAAGTTCTACAGCCTGGCTGTGATCAGGATGAATGATTTGTGCACGAGGTTGAAGTTGACAGACGACGAGCTCAAGAGGAAGATATGGACCTGTGTGGAGCACTCCGTCATGAACCAGACACAGCTCATGAGGGACAGCAATCAAGTTGAGAGAACATTCGCGGACATCATGCGCTGTTACAGGCAGAGACCTCTGGCGGACAATCATGTTTATAGATCAGTTCTTATTAACAAAGGAAACGATGAAGAATCACCGGAGAGAGGAGATCTTATAAATTTTTACAATAAAGTATATGTTAAATGCATGCAGAATTTCGCGCTACGGTTCACTGGGAAACATAAAGATGGCTGCAGCCTATCTCCGCTGCCGGCTGGTCGCGCCGGACGCTCGGGCCGCTCGGGCTGGTCTCCCGGCGGCCAGCGAGTGTCGGAGCGCCACCAGTTGTACGTGAAGCCGCTCACCACCCCGCCTCACCACCACCACCACCTCACCTACAGGTTCAGCCGCAGCCCCGCCAAGGATCTCCAGGCCATTAACACTATGGTGTCGTGCGAGGTGGGAGGAGTGAAGCGGGCTGTGGACGGCGAGGCTGGCGACGTGGTCAAAAGAGCTCGGTGTGCGGCGCCGGGGGTCGCGCGCAAGCTACAGGGTCTAGTTAGCGACCGACAGGCTGTTTAG

Protein sequence:

>DPOGS214677-PA
MAKPEESEENWVATMDNLCSQLNVDPGAAKKSKESYSEIKQNYTLDGDELHWMACALYVACRTSITPTVQSGKAVEGNCVSLTRLLRLCNISLIQFFNKIKNWMEMASMSTDFKDRITRLERKFAVSTVLFRKFQPIFQEIFSGLTNEPVKSNTKSKKQKLQPCTTNALFEFSWCLYVCVKGEFHNSADDLVDMYHVLLSCLDFVFANAFMARRYDVINPAFKGLPSDWLKDDFELPKKPPCIISVLCEIKEGLAVEAATMKEYSWRPVIKTFFDKGILKGNNDQLTGLLDIGNFDANLKSLNNLYETYVLSVGEFDERIFLGEHANEQIGTKNKVSGDEISQVIASFGPSSRACPDTPLTGRRYLARREELTPVSEATNSLARLAALLRQARPKPSPTLLRFFADCGVDKVTIVKNVVQPCNGWMEKFSESLSECNCSKETIAFRCNMVTCLYYKVFEHIITEEHRKKPQLSLQILLSQETFQLTVYACCTEVVLHAYGVHSLRFPRVLQIYGLSAFHFYKIIELVVQAVVQKLSRDVIKHLNAILLSQETFQLTVYACCTEVVLHAYGVHSLRFPRVLQIYGLSAFHFYKIIELVVQAVVQKLSRDVIKHLNAVEEQVLESLVWTSDSPLWDQLSKNPIPAAIEVYAQDSPNRRNASGLQSPISAAIDRYLTPMADQAKKQLFKDNIKPGQSLLVQTNNNVKQEPQQVPIVSTAETTPNTTPKKANNSLILFFRKFYSLAVIRMNDLCTRLKLTDDELKRKIWTCVEHSVMNQTQLMRDSNQVERTFADIMRCYRQRPLADNHVYRSVLINKGNDEESPERGDLINFYNKVYVKCMQNFALRFTGKHKDGCSLSPLPAGRAGRSGRSGWSPGGQRVSERHQLYVKPLTTPPHHHHHLTYRFSRSPAKDLQAINTMVSCEVGGVKRAVDGEAGDVVKRARCAAPGVARKLQGLVSDRQAV-