DPOGS214716 | ||
---|---|---|
Transcript | DPOGS214716-TA | 558 bp |
Protein | DPOGS214716-PA | 185 aa |
Genomic position | DPSCF300022 - 198445-200363 | |
RNAseq coverage | 1252x (Rank: top 10%) |
Annotation | ||||
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Heliconius | HMEL009159 | 2e-105 | 97.84% |   |
Bombyx | BGIBMGA004891-TA | 2e-96 | 87.03% |   |
Drosophila | bai-PA | 4e-82 | 74.59% |   |
EBI UniRef50 | UniRef50_Q8SXY6 | 4e-80 | 74.59% | Transmembrane emp24 domain-containing protein bai n=37 Tax=Metazoa RepID=TMEDA_DROME |
NCBI RefSeq | NP_001040510.1 | 7e-95 | 87.03% | transmembrane trafficking protein [Bombyx mori] |
NCBI nr blastp | gi|114052334 | 1e-93 | 87.03% | transmembrane trafficking protein precursor [Bombyx mori] |
NCBI nr blastx | gi|114052334 | 2e-89 | 87.03% | transmembrane trafficking protein precursor [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0006810 | 6.6e-46 | transport | |
GO:0016021 | 6.6e-46 | integral to membrane | ||
KEGG pathway |   | |||
InterPro domain | [1-185] IPR015720 | 9.8e-108 | TMP21-related | |
[4-179] IPR009038 | 6.6e-46 | GOLD | ||
Orthology group | MCL14982 |   | Single-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214716-TA
ATGTGGAGTTTAGCACCAAACACACAAAAGTGTTTAAAAGAAGAACTACACGCTAATGTGCTTGTAGCTGGTGAATATGAGGTTACCGAAGCTGCTGGGCAACGAATTGATTACATTGTCCGTGACTCAAAAGGTCACATACTTGCTCAGAAAGATGGCATCACCAAGGGAAAATTCACTTTTGTAACAGAGACATATGATACATTTGAAGTCTGTTTCATTTCAAAAGTGCCTCAAGAACGTCGCGGTGTTGCCCAAGAAGTGACATTGGACATCAAAGTTGGCATTGAAGCAAAGAACTATGAAGGCATCGGGGAGGCTGCGAAATTAAAACCGATGGAGCTCGAGTTGAAGAGGTTAGAAGATTTATCAGAAGCTATTGTACAGGACTTCACTCTTATGAGGAAGAGGGAGGAAGAAATGAGAGATACTAATGAGTCTACAAACAATCGTGTGCTATTTTTCAGTATATTTTCAATGGTGTGCCTCTTAGGGCTGGCCACATGGCAGGTGTTGTATCTACGTAGATACTTCAAAGCCAAAAAACTTATTGAATAA
>DPOGS214716-PA
MWSLAPNTQKCLKEELHANVLVAGEYEVTEAAGQRIDYIVRDSKGHILAQKDGITKGKFTFVTETYDTFEVCFISKVPQERRGVAQEVTLDIKVGIEAKNYEGIGEAAKLKPMELELKRLEDLSEAIVQDFTLMRKREEEMRDTNESTNNRVLFFSIFSMVCLLGLATWQVLYLRRYFKAKKLIE-