DPOGS214731 | ||
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Transcript | DPOGS214731-TA | 708 bp |
Protein | DPOGS214731-PA | 235 aa |
Genomic position | DPSCF300022 + 114026-117194 | |
RNAseq coverage | 68x (Rank: top 67%) |
Annotation | ||||
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Heliconius | HMEL008594 | 2e-103 | 78.07% |   |
Bombyx | BGIBMGA005137-TA | 6e-94 | 83.96% |   |
Drosophila | CG9172-PB | 4e-79 | 60.71% |   |
EBI UniRef50 | UniRef50_G7YF61 | 1e-70 | 72.39% | NADH dehydrogenase (Ubiquinone) Fe-S protein 7 (Fragment) n=1 Tax=Clonorchis sinensis RepID=G7YF61_CLOSI |
NCBI RefSeq | NP_001040530.1 | 1e-91 | 83.42% | NADH-ubiquinone oxidoreductase 20 kDa subunit precursor [Bombyx mori] |
NCBI nr blastp | gi|114053179 | 2e-90 | 83.42% | NADH-ubiquinone oxidoreductase 20 kDa subunit [Bombyx mori] |
NCBI nr blastx | gi|114053179 | 1e-90 | 83.42% | NADH-ubiquinone oxidoreductase 20 kDa subunit [Bombyx mori] |
Group | ||||
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Gene Ontology | GO:0016651 | 2.8e-106 | oxidoreductase activity, acting on NADH or NADPH | |
GO:0051539 | 2.8e-106 | 4 iron, 4 sulfur cluster binding | ||
GO:0055114 | 2.8e-106 | oxidation-reduction process | ||
GO:0048038 | 1.9e-70 | quinone binding | ||
GO:0008137 | 1.9e-70 | NADH dehydrogenase (ubiquinone) activity | ||
KEGG pathway | dme:Dmel_CG9172 | 3e-77 |   | |
  | K03940 (NDUFS7) | maps-> | Huntington's disease | |
  |   |   | Oxidative phosphorylation | |
  |   |   | Alzheimer's disease | |
  |   |   | Parkinson's disease | |
InterPro domain | [83-234] IPR014406 | 2.8e-106 | [NiFe]-hydrogenase-3-type complex, small subunit/NADH:quinone oxidoreductase, subunit NuoB | |
[85-225] IPR006138 | 1.9e-70 | NADH-ubiquinone oxidoreductase, 20 Kd subunit | ||
[97-226] IPR006137 | 6.2e-43 | NADH:ubiquinone oxidoreductase-like, 20kDa subunit | ||
Orthology group | MCL11080 |   | Multiple-copy universal gene |
Genotypes for resequenced monarchs and outgroup Danaus species |
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>DPOGS214731-TA
ATGATCAGAAAAGGATTTAATACGAGATGTTTACTATTCAGGAATTTTACTTCAAAAGCCAATGAGCCTAAGGAGCTGCAAAAGACAGAAGAGCCTCAGACGAAGAAAGAAGCAGATCCTTGTGCGGAAGTAAAGAAACCAAAAGCCAAGAAGTATCCACCCGTCAACCTGCATGGCCCGCAGAGCTTCAAGCTCAGTGAGAAGAGACCTTACTCGCCATTTCATTTCAAAGGACAGTCCACAGTGGAGTGGGTGGTCGCCCGAGCTGATGACATACTCAACTGGGGGAGGAAGAACTCCTTGTGGCCTCTGACCTTCGGTCTCGCCTGTTGCGCGCTAGAAATGATGCACTATGCCGGTCCCAGATACGACATGGATCGCTTCGGCATGGTGTTCCGTGGGACTCCACGTCAAACGGATGTGATCATCGTGGCGGGAACTGTCACCAACAAGATGGCTCCCATCTTGCGCAAGACCTACGACCTCATGCCGGATCCCAAATTCGTTGTGTCAATGGGTAGCTGTGCCAACGGCGGCGGCTACTACCACTACACGTACTCCACCGTGCGAGGAGCTGATAGAATCATACCAGTTGATATCTACGTCCCAGGCTGTCCTCCGTCGGCCGAGGCTCTGTTGTATGCGATGCTGCAGCTTCAGAAGAAAGTCAAACGTATGCGCATGGTTCAGACCTGGTACAGGCATTAA
>DPOGS214731-PA
MIRKGFNTRCLLFRNFTSKANEPKELQKTEEPQTKKEADPCAEVKKPKAKKYPPVNLHGPQSFKLSEKRPYSPFHFKGQSTVEWVVARADDILNWGRKNSLWPLTFGLACCALEMMHYAGPRYDMDRFGMVFRGTPRQTDVIIVAGTVTNKMAPILRKTYDLMPDPKFVVSMGSCANGGGYYHYTYSTVRGADRIIPVDIYVPGCPPSAEALLYAMLQLQKKVKRMRMVQTWYRH-