| DPOGS214778 | ||
|---|---|---|
| Transcript | DPOGS214778-TA | 180 bp |
| Protein | DPOGS214778-PA | 59 aa |
| Genomic position | DPSCF300022 + 1594494-1594749 | |
| RNAseq coverage | 878x (Rank: top 14%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL011883 | 9e-15 | 70.37% | |
| Bombyx | % | |||
| Drosophila | RpL29-PD | 5e-12 | 74.36% | |
| EBI UniRef50 | UniRef50_D1M840 | 6e-12 | 63.79% | Ribosomal protein L29 n=3 Tax=Chrysomelinae RepID=D1M840_9CUCU |
| NCBI RefSeq | XP_001119952.1 | 6e-14 | 65.52% | PREDICTED: similar to Ribosomal protein L29 CG10071-PA, isoform A [Apis mellifera] |
| NCBI nr blastp | gi|342905891 | 7e-13 | 74.07% | 60S ribosomal protein L29 [Rhodnius prolixus] |
| NCBI nr blastx | gi|342905891 | 2e-14 | 72.22% | 60S ribosomal protein L29 [Rhodnius prolixus] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005840 | 1.4e-20 | ribosome | |
| GO:0006412 | 1.4e-20 | translation | ||
| GO:0005622 | 1.4e-20 | intracellular | ||
| GO:0003735 | 1.4e-20 | structural constituent of ribosome | ||
| KEGG pathway | ame:724631 | 2e-13 | ||
| K02905 (RP-L29e, RPL29) | maps-> | Ribosome | ||
| InterPro domain | [1-35] IPR002673 | 1.4e-20 | Ribosomal protein L29e | |
| Orthology group | MCL10486 | Patchy | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214778-TA
ATGGCGAAGTCAAAGAACCACACAAATCACAATCAAAACCGCAAGGCTCACCGAAATGGTATCAAAAAACCTAAGAAGTTCAGACACGAATCTACTCTCGGCGTAAGTATCAATTACAAATACAGCAATGTGATTACACGTTTTTTAAAGGTACATAACATTATCAGTAATGAAACTTAA
>DPOGS214778-PA
MAKSKNHTNHNQNRKAHRNGIKKPKKFRHESTLGVSINYKYSNVITRFLKVHNIISNET-