DPOGS214792 | ||
---|---|---|
Transcript | DPOGS214792-TA | 171 bp |
Protein | DPOGS214792-PA | 56 aa |
Genomic position | DPSCF300059 - 699982-700152 | |
RNAseq coverage | 127x (Rank: top 57%) |
Annotation | ||||
---|---|---|---|---|
Heliconius | HMEL004977 | 5e-26 | 85.71% |   |
Bombyx | BGIBMGA012103-TA | 2e-25 | 83.93% |   |
Drosophila | tos-PA | 2e-18 | 62.50% |   |
EBI UniRef50 | UniRef50_UPI0002246B2D | 1e-19 | 71.43% | UPI0002246B2D related cluster n=1 Tax=unknown RepID=UPI0002246B2D |
NCBI RefSeq | XP_001603157.1 | 5e-20 | 71.43% | PREDICTED: similar to exonuclease [Nasonia vitripennis] |
NCBI nr blastp | gi|345486309 | 5e-19 | 71.43% | PREDICTED: exonuclease 1-like [Nasonia vitripennis] |
NCBI nr blastx | gi|345486309 | 4e-18 | 71.43% | PREDICTED: exonuclease 1-like [Nasonia vitripennis] |
Group | ||||
---|---|---|---|---|
Gene Ontology | GO:0006281 | 8.3e-21 | DNA repair | |
GO:0004518 | 8.3e-21 | nuclease activity | ||
KEGG pathway | nvi:100119370 | 2e-19 |   | |
  | K10746 (EXO1) | maps-> | Mismatch repair | |
InterPro domain | [1-56] IPR006084 | 8.3e-21 | DNA repair protein (XPGC)/yeast Rad | |
[1-52] IPR006085 | 3.5e-09 | XPG N-terminal | ||
Orthology group |   |
Genotypes for resequenced monarchs and outgroup Danaus species |
---|
>DPOGS214792-TA
ATGGGTATTACTGGTTTGATACCCTTTTTGGACAAAGCCTCTAGAAGGGCAAATGTAAGCGAATTCAGTGGATCATCAGTTGCAATTGATACTTATTGCTGGCTTCACAAGGGGGCTTTTGCTTGTGCTGATAAACTAGTTCGGGGAGAAGAAACCGATATGCAAGTATAA
>DPOGS214792-PA
MGITGLIPFLDKASRRANVSEFSGSSVAIDTYCWLHKGAFACADKLVRGEETDMQV-