| DPOGS214833 | ||
|---|---|---|
| Transcript | DPOGS214833-TA | 723 bp |
| Protein | DPOGS214833-PA | 240 aa |
| Genomic position | DPSCF300375 + 69778-71525 | |
| RNAseq coverage | 91x (Rank: top 63%) | |
| Annotation | ||||
|---|---|---|---|---|
| Heliconius | HMEL013671 | 1e-91 | 72.31% | |
| Bombyx | BGIBMGA013959-TA | 7e-90 | 72.46% | |
| Drosophila | HLH3B-PA | 7e-26 | 83.33% | |
| EBI UniRef50 | UniRef50_D6WU74 | 4e-30 | 55.22% | Putative uncharacterized protein n=2 Tax=Tribolium castaneum RepID=D6WU74_TRICA |
| NCBI RefSeq | XP_969923.2 | 4e-31 | 55.22% | PREDICTED: similar to helix-loop-helix protein hen [Tribolium castaneum] |
| NCBI nr blastp | gi|189239109 | 6e-30 | 55.22% | PREDICTED: similar to helix-loop-helix protein hen [Tribolium castaneum] |
| NCBI nr blastx | gi|189239109 | 1e-30 | 40.81% | PREDICTED: similar to helix-loop-helix protein hen [Tribolium castaneum] |
| Group | ||||
|---|---|---|---|---|
| Gene Ontology | GO:0005634 | 4.7e-21 | nucleus | |
| GO:0006355 | 4.7e-21 | regulation of transcription, DNA-dependent | ||
| KEGG pathway | ||||
| InterPro domain | [53-110] IPR011598 | 4.7e-21 | Helix-loop-helix DNA-binding | |
| [59-111] IPR001092 | 2.4e-17 | Helix-loop-helix DNA-binding domain | ||
| Orthology group | MCL26153 | Lepidoptera specific | ||
| Genotypes for resequenced monarchs and outgroup Danaus species |
|---|
>DPOGS214833-TA
ATGGCGTCGGATCAGGAGTCGTGTTCTGATGAGGAACCTGACAGTGAGATGTTGAGCGACGACCTCTGTCTGCCCGACAGCGAGGATGAGAGACAACCAGCCAGGAACGTGCAGAGTCTCCCGGAAGATCTTCCTCAGTTGAGCGTTCTTCGGCCTCCTCGTAAGCTGTTCACCAATTGTCGCGAGCGTTGGAGACAACAAAATGTGAGTGGAGCCTTCGCTGAGCTCAGGAGACTGGTCCCAACACATCCACCAGACAAGAAACTGTCCAAGAATGAAATACTGCGAATGGCTATTAGGTACATTGGCCTTCTTTGCGAGGTTCTCGAATGGCAAAAGAACCACGGTCTCGTGACGAACAAAGAAAACTCTGGTTTGGCGATAAAATGCGAGTCACCATTGAGCCCAGCTGCCCGACGTCTGCGACTCAAAAGACATTACGACGATGATTCCAGACGACACTACGAGTCGGAATACGCGAGATATGGAAACGAGGAGAACGAAGAAATACGAAGAAACATACAAAGGAGTGCCCCAAAAGCAGAGTTCTTCTTTGGCAAGGACCACTTGAAAGTGTTACGTAATCAGTATTATTTCCCAAGGTGGCGTCAAATGCCGTTCAGGAATTTGGGGGAGAGGAACGGAAACAATTTGCTGATGATAGCTCCAGCTAAAGATGAAAAAGATACTTCCAAAGATAAAGTTAATGGAAAAGAGAAGTAG
>DPOGS214833-PA
MASDQESCSDEEPDSEMLSDDLCLPDSEDERQPARNVQSLPEDLPQLSVLRPPRKLFTNCRERWRQQNVSGAFAELRRLVPTHPPDKKLSKNEILRMAIRYIGLLCEVLEWQKNHGLVTNKENSGLAIKCESPLSPAARRLRLKRHYDDDSRRHYESEYARYGNEENEEIRRNIQRSAPKAEFFFGKDHLKVLRNQYYFPRWRQMPFRNLGERNGNNLLMIAPAKDEKDTSKDKVNGKEK-